RetrogeneDB ID: | retro_ttru_123 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1299:28439..28809(+) | ||
Located in intron of: | ENSTTRG00000000482 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SCOC | ||
Ensembl ID: | ENSTTRG00000010677 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:HGNC Symbol;Acc:20335] |
Percent Identity: | 84.68 % |
Parental protein coverage: | 77.85 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GQLVRVSRPEYPPGSFLLPAPQTADHSSRILYPRPKS-LLPKMMNADMDAVDAENHVELEEKTRLINQVL |
GQLV.VSRPE...GS..LP.PQTADHS.RILYPRP.S.LL.K.MNAD.DAVDAEN.VELEEKT.LINQVL | |
Retrocopy | GQLVQVSRPELSSGSLPLPVPQTADHSPRILYPRPRS>LLLKVMNADTDAVDAENQVELEEKT*LINQVL |
Parental | ELLHTLEHLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK |
EL.HTLE.LSARVDAVKEENLKLKSENQVLGQ.IENLMSASSVFQTTDTKS.RK | |
Retrocopy | ELQHTLEDLSARVDAVKEENLKLKSENQVLGQ*IENLMSASSVFQTTDTKSQRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |