RetrogeneDB ID: | retro_dord_461 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_20221:12274..12557(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Scoc | ||
Ensembl ID: | ENSDORG00000000177 | ||
Aliases: | None | ||
Description: | short coiled-coil protein [Source:MGI Symbol;Acc:MGI:1927654] |
Percent Identity: | 85.71 % |
Parental protein coverage: | 98.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SSGFFCPRRSSVPRMMNADMDAVDAENQVELEEK-TRLINQVLELQHTLEDLSARVDAVKE-ENLKLKSE |
SSGFFC.R.SSVPRMMN.D...VDAENQ.ELEEK.TRLINQVLELQHTLED.SARVDAVKE.ENLKLKSE | |
Retrocopy | SSGFFCARHSSVPRMMNTDVN-VDAENQMELEEK<TRLINQVLELQHTLEDISARVDAVKE<ENLKLKSE |
Parental | NQVLGQYIENLMSASSVFQTTDTKSKRK |
NQVLGQYIENLMSASSVFQ.T..KSKR. | |
Retrocopy | NQVLGQYIENLMSASSVFQRTEAKSKRR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |