RetrogeneDB ID: | retro_etel_1334 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_248471:4069..4531(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000009953 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.1 % |
Parental protein coverage: | 54.84 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSVDVASPQNLLEASDSKNSSPVTTSLGTKEDGTSLQMSSAEPPYSETG-SPLPSSVDLLLQKSPDSSTS |
MSV.VASPQNLLEASDSKNSSPVTTSLG.KEDGTSLQMSSAEPPYSET..SPLPSSVDLLLQKSPDSSTS | |
Retrocopy | MSVAVASPQNLLEASDSKNSSPVTTSLGAKEDGTSLQMSSAEPPYSETARSPLPSSVDLLLQKSPDSSTS |
Parental | PKVQLPASAETDAARKESKGPGKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT |
PKV.LPASAETDAARKESKG.GKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT | |
Retrocopy | PKVKLPASAETDAARKESKGQGKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT |
Parental | WFQNQRMKCKRWQK |
WFQNQRMKCKRWQK | |
Retrocopy | WFQNQRMKCKRWQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |