RetrogeneDB ID: | retro_etel_134 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2474:413026..413605(-) | ||
Located in intron of: | ENSETEG00000017045 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.85 % |
Parental protein coverage: | 69.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSVDVASPQNLLEASDSKNSSPVTTSLGTKEDGTSLQMSSAEPPYSETG-SPLPSSVDLLLQKSPDSSTS |
MSV.VASPQNLLEASDSKNSSPVTTSLG.KED.TSLQMSSAEPPYSET..S.LPSSVDLLLQKSPDSSTS | |
Retrocopy | MSVAVASPQNLLEASDSKNSSPVTTSLGAKEDCTSLQMSSAEPPYSETARSLLPSSVDLLLQKSPDSSTS |
Parental | PKVQLPASAETDAARKESKGPGKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT |
PKVQLPASAETDAARKESKG.GKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT | |
Retrocopy | PKVQLPASAETDAARKESKGQGKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKT |
Parental | WFQNQRMKCKRWQKTTNWSKNNHAVTQKVSAPTEYLDVCASYHQGCLPSGNLPM |
WFQNQRMKCKRWQKTTNWSKNNHAVTQ.VSAPTE.LDVCAS.HQGCLPSGNLPM | |
Retrocopy | WFQNQRMKCKRWQKTTNWSKNNHAVTQ-VSAPTECLDVCASDHQGCLPSGNLPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |