RetrogeneDB ID: | retro_etel_963 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_192200:1536..2056(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 56.91 % |
Parental protein coverage: | 63.08 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | MSVDVASPQNLLEASDSKNSSPVTTSL-GTKEDGTSLQMSSA-EPPYSETG-SPLP-SSVDLLLQKSPDS |
.SV.V.SPQNL.EAS.S..SSP.T....G..E..TSLQMSSA.E.PY.ET..SP.P.S...LL......S | |
Retrocopy | ISVGVPSPQNLREASNSRDSSPTTPIW>GAEENDTSLQMSSA<EAPYAETAVSPAP<STDLLLQDNPESS |
Parental | STSPKVQLPASAETDAARKESKGPGKKQKVRTVFSQTQLCILKDHFQKQKYLSLQQMQELSEVLNLSYKQ |
...PK.QLP...E.........G.GKK..V..VFSQTQLCILK....KQK.LSLQQMQE.S.VLNL.YKQ | |
Retrocopy | TS-PKAQLPD*RE-EPSEEAK*GMGKKRTV*SVFSQTQLCILKEGCRKQKDLSLQQMQEHSKVLNLRYKQ |
Parental | VKTWFQNQRMKCKRWQKTTNWSKNNHAVTQKVSAPTE-YLD |
VK...QNQR.K.KR.Q.T.NWS.....VTQ..SAPT..YLD | |
Retrocopy | VKLGLQNQRRKRKR*QETINWSQKGPGVTQ-ASAPTD<YLD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |