RetrogeneDB ID: | retro_etel_1384 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_257150:277..643(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1E1 | ||
Ensembl ID: | ENSETEG00000019283 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857] |
Percent Identity: | 62.5 % |
Parental protein coverage: | 54.87 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | MALSDADVQKQIKHM-MAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEY-YEKKEK-QIEQQ |
MA.SDAD.Q.QI.H...AFIE.EA.EK.EE.D.KAE..FNI..G.LVQTQ..KIMEY...KK...QI.Q. | |
Retrocopy | MAHSDADMQNQINHL<LAFIEEEAHEKTEETDVKAE--FNIKIGCLVQTQKCKIMEY<LNKKKRNQIDQL |
Parental | KKIQMSNLMNQ-ARLKVLRARDDLIMGLLSEAKQRLSKVVKDTTRYQVLLDGLVLQGL |
KKIQ.SNLMNQ.ARL.VLR..DDLI..LL...K.RLSK..KDT.....LLDG.V..GL | |
Retrocopy | KKIQVSNLMNQ<ARLIVLRVKDDLISDLLNKPK*RLSKMLKDTNKC*FLLDGVVI*GL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |