RetrogeneDB ID: | retro_ggor_2015 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 4:10186540..10186795(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DYNLT1 | ||
Ensembl ID: | ENSGGOG00000009979 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.7 % |
Parental protein coverage: | 76.11 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRW |
AIGGNAYQHSKVNQWTTNV.EQTLSQL.KLGKPFKYIVTCVI.QKNGAG..TA.SCFWDSSTDGS.TVRW | |
Retrocopy | AIGGNAYQHSKVNQWTTNV-EQTLSQLSKLGKPFKYIVTCVIIQKNGAGSYTATSCFWDSSTDGSYTVRW |
Parental | ENKTMYCIVSAFGLSI |
ENKTMYCIV.AFGLSI | |
Retrocopy | ENKTMYCIVGAFGLSI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 8 .92 RPM |
SRP007412_cerebellum | 0 .00 RPM | 11 .90 RPM |
SRP007412_heart | 0 .00 RPM | 16 .48 RPM |
SRP007412_kidney | 0 .00 RPM | 80 .84 RPM |
SRP007412_liver | 0 .00 RPM | 25 .22 RPM |
SRP007412_testis | 0 .00 RPM | 109 .30 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_2910 |
Pan troglodytes | retro_ptro_1966 |
Pongo abelii | retro_pabe_2424 |