RetrogeneDB ID: | retro_ogar_1176 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873538.1:729351..729617(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DYNLT1 | ||
Ensembl ID: | ENSOGAG00000000494 | ||
Aliases: | None | ||
Description: | dynein, light chain, Tctex-type 1 [Source:HGNC Symbol;Acc:11697] |
Percent Identity: | 79.57 % |
Parental protein coverage: | 79.65 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MEDYQASEETAFVVDEVSNIVKEAIESAIG-GNAYQHSKVNQW-TTNVVEQTLSQLTKLGKPFKYIVT-C |
...YQA.E.T.FVVDEVSN.VKEAIESA.G.GN.YQHSK.NQ..TTNVVEQTLSQLTKLGKPFKYI.T.C | |
Retrocopy | VDNYQAMEPT-FVVDEVSNLVKEAIESATG<GNTYQHSKINQG<TTNVVEQTLSQLTKLGKPFKYIET>C |
Parental | VIMQKNGAGLHTASSCFWDSSTD |
VIMQKNGAG.H.A.SCFWDS.TD | |
Retrocopy | VIMQKNGAGVHPAHSCFWDSCTD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |