RetrogeneDB ID: | retro_meug_1598 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold474849:161..817(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000004095 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.37 % |
Parental protein coverage: | 94.47 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | ATSADVKMSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELE |
A...D.KMS.SEEVSWI..FCGL.GNEFF.EVDEDYIQD.FNLTGLN.QVPHY.QAL.MILDLE.DEELE | |
Retrocopy | APLVDIKMSGSEEVSWIL*FCGL*GNEFFREVDEDYIQDNFNLTGLNKQVPHYQQALVMILDLETDEELE |
Parental | DNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMV |
DNPN.SDLIEQ.AE.L.....A.YILTN..IAQMLEKYQQG..G.CPRVY.ENQPML..GLSDIPGEAMV | |
Retrocopy | DNPNHSDLIEQTAEIL---LKACYILTNCDIAQMLEKYQQGNSGHCPRVY*ENQPMLSNGLSDIPGEAMV |
Parental | KLYCPKCMDVYT-PKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQ |
KLYCP.CMDVYT.PKS.RHHHTDGAYF.TGFPHMLFMVHPE...K..ANQF..RLYGFKI..MAYQLQLQ | |
Retrocopy | KLYCPECMDVYT<PKSFRHHHTDGAYFDTGFPHMLFMVHPE*GAKQHANQFMTRLYGFKIYLMAYQLQLQ |
Parental | AASNFKSPVKTIR |
AASNF.SPVK.IR | |
Retrocopy | AASNFSSPVKIIR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |