RetrogeneDB ID: | retro_meug_1606 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold47810:1096..1534(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRTO4 | ||
Ensembl ID: | ENSMEUG00000000027 | ||
Aliases: | None | ||
Description: | mRNA turnover 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18477] |
Percent Identity: | 83.67 % |
Parental protein coverage: | 89.63 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MPKSKRDKKVSLTKTAKKGLELKQHLIEELRKCVDMYKYLFIFSVANMRNSKLKDIRSAWKHSRIFFGKN |
MPKSK.DK..SL.KT.K.GL.LKQHLIEE.RKCVDMYKYLFIFSVANMRNSKLKDIRSAWKHS.IFFGKN | |
Retrocopy | MPKSKQDK-FSLMKTTKQGLQLKQHLIEEVRKCVDMYKYLFIFSVANMRNSKLKDIRSAWKHSWIFFGKN |
Parental | KVMMVALGRGPADEYKDNLHQVSKKLKGEVGLLFTNRTKKEVNEWFSKYTEMDYARAGNKATFTVSLDAG |
KVMMVALG.G.ADEYKD.LHQVSKKLKGEVGLLFTNRTK.EVNEWFSKYTEMD.A.AG.KATFTVSL... | |
Retrocopy | KVMMVALG*GLADEYKDSLHQVSKKLKGEVGLLFTNRTKEEVNEWFSKYTEMD*A*AGRKATFTVSLEQF |
Parental | PLEQFPH |
P....P. | |
Retrocopy | PHSMEPN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |