RetrogeneDB ID: | retro_mmur_1235 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_3505:123052..123366(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRTO4 | ||
Ensembl ID: | ENSMICG00000004019 | ||
Aliases: | None | ||
Description: | mRNA turnover 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18477] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 68.15 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | LRKCVDTYKYLFIFSVANMRNSK-LKDIRNAWKHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRG |
LRKCVDTYKYL.IFS.A.MR....L.DI.....HS.MFFGKN..MMVALG......YK.NL.QV..KLRG | |
Retrocopy | LRKCVDTYKYLVIFSMASMRTGS<LMDICMPGEHSWMFFGKN*GMMVALGSELIC*YKYNL-QVIRKLRG |
Parental | EVGLL-FTNRSKEEVNEWFTKYTEMDFA-RAGNK-ATFTVS |
EVGLL.FTN.SKEEVNEWF.KY..MD....AGNK.AT.TVS | |
Retrocopy | EVGLL<FTNLSKEEVNEWFMKYMKMDYT<LAGNK<ATVTVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |