RetrogeneDB ID: | retro_mluc_2282 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430173:780121..780316(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS21 | ||
Ensembl ID: | ENSMLUG00000000346 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S21 [Source:UniProtKB/TrEMBL;Acc:G1NT34] |
Percent Identity: | 65.15 % |
Parental protein coverage: | 79.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | KCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSK |
KCSA...II..KDH..IQM..AEVDKVTGR.N.QFKTYA.CG...RMGES..SIL..AKA..I.S. | |
Retrocopy | KCSARKCIIDTKDH-TIQMSMAEVDKVTGRCNVQFKTYAVCGTFCRMGESENSIL*VAKANSIISQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017399 | 2 retrocopies | |
Bos taurus | ENSBTAG00000020795 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000012676 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000014195 | 5 retrocopies | |
Gorilla gorilla | ENSGGOG00000023745 | 7 retrocopies | |
Latimeria chalumnae | ENSLACG00000012753 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000346 | 3 retrocopies |
retro_mluc_1009, retro_mluc_2136, retro_mluc_2282 ,
|
Monodelphis domestica | ENSMODG00000016769 | 1 retrocopy | |
Ornithorhynchus anatinus | ENSOANG00000003361 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000011205 | 8 retrocopies | |
Pan troglodytes | ENSPTRG00000013708 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000006325 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000021825 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000001029 | 5 retrocopies |