RetrogeneDB ID: | retro_itri_1027 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393359.1:8058135..8058377(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000001029 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.05 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINVA-EVDKVTGRFNGQFKTYAICGAIRRMGESDDSI |
.QN.AGEFVDLY.PRKCS.SNRIIGAK.H.SIQ.NVA....KVTGRFN.QFKTYAICGAI.RMGESDD.I | |
Retrocopy | IQNRAGEFVDLYMPRKCSTSNRIIGAKEHVSIQMNVA<QEGKVTGRFNRQFKTYAICGAIHRMGESDDPI |
Parental | LRLAKADCIVSK |
L.L.KAD.I.SK | |
Retrocopy | LLLVKADGIISK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |