RetrogeneDB ID: | retro_mputfur_362 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896905.1:17994803..17995474(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP0 | ||
Ensembl ID: | ENSMPUG00000003055 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
Percent Identity: | 67.98 % |
Parental protein coverage: | 70.35 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | LLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLM-GKNTMMRKAIRGHLENNPALEK-LLPHIRGNVG |
LL...PKCFIVG....GSKQMQQI.M.L.GKAV..M.GK.TM..KAI..HLEN.PALEK.LLPH.R.NVG | |
Retrocopy | LLGE*PKCFIVGTGKIGSKQMQQIHMALHGKAVGPM<GKSTMIDKAI*RHLENQPALEK>LLPHMRRNVG |
Parental | FVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSD |
F.FT..D.TEI.DMLLANK.PA...A.A.APC.V.V.AQNTGLG..KT.FFQALGITTKISRGTIEILSD | |
Retrocopy | FTFTEKDFTEITDMLLANK*PAVTCACAKAPCKVFVSAQNTGLGLKKTAFFQALGITTKISRGTIEILSD |
Parental | VQLIKTG-DKVGASEATLLNMLNIS--PFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVAS |
VQ...T..DKVGA.....L.MLNIS...FSFG..IQ.VFDNGSIY.PEVL......LHS.F.E....VAS | |
Retrocopy | VQTFNTE<DKVGAGKIIVLTMLNISIPAFSFGITIQ*VFDNGSIYSPEVLT-SQRKLHSCFMENIPKVAS |
Parental | VCLQIGYPTVASVPHSII |
VCLQ.GY.T.ASVPHS.I | |
Retrocopy | VCLQTGYLTIASVPHSTI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |