RetrogeneDB ID: | retro_mputfur_645 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896930.1:9294151..9294655(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WBP2 | ||
Ensembl ID: | ENSMPUG00000013775 | ||
Aliases: | None | ||
Description: | WW domain binding protein 2 [Source:HGNC Symbol;Acc:12738] |
Percent Identity: | 53.41 % |
Parental protein coverage: | 65.53 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | ELTFNDMKNVPEAFKGTKKGTVY-LTPYRIIFLSKGRDAMQSFMMPFYLMKDCEIKQPVFGANYIKGTVK |
E..F.DMKN.PE.FKGTK.GT.Y.L.P....F.....DA.QSFMMPFYL..DC..K.PV...NYIK.TVK | |
Retrocopy | EFVFKDMKNMPEVFKGTKRGTIY<LLPSQFHFSVQRKDAIQSFMMPFYLITDCKTKRPVLDVNYIKRTVK |
Parental | AEAGGGWEGAASYKLTFTAGGAIEFGQR-MLQVASQASRGEAPNGAYGYSHMPGGAYVFPPPFANGMYPC |
.E..G.....A..K.TFT.....E...R.MLQV....S..EA.N.AY.YSH.P..A.VFP.P..NGMYPC | |
Retrocopy | VEVAG--KVTALFKQTFTPRATAESDTR<MLQVRAPFSKAEASNAAYRYSHVPRRALVFPLPVTNGMYPC |
Parental | PPGYPYPP-PPPEFYPGPPMMDGAMGYVQPPPPPYP |
..GY.YPP..P..FY.GP..M...M...QP.P.PYP | |
Retrocopy | HSGYFYPP<TPFDFYLGPRVMN--ME*LQPWPQPYP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000004946 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000037619 | 1 retrocopy | |
Homo sapiens | ENSG00000132471 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000009241 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000000070 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000009381 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000007725 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000013775 | 1 retrocopy |
retro_mputfur_645 ,
|
Nomascus leucogenys | ENSNLEG00000001625 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000006045 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000008640 | 3 retrocopies | |
Pan troglodytes | ENSPTRG00000009660 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000021421 | 2 retrocopies |