RetrogeneDB ID: | retro_ocun_234 | ||
Retrocopylocation | Organism: | Rabbit (Oryctolagus cuniculus) | |
Coordinates: | 19:17215643..17215907(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOCUG00000002208 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DBI | ||
Ensembl ID: | ENSOCUG00000004566 | ||
Aliases: | CPN2, ACBP, DBI, EP | ||
Description: | carboxypeptidase N, polypeptide 2 (CPN2), mRNA [Source:RefSeq mRNA;Acc:NM_001082113] |
Percent Identity: | 55.42 % |
Parental protein coverage: | 95.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSQAEFEKAAEEVKNLKTKPADAEMLFIYSHYKQATVGDVNTERPGMLDLKGKAKWDAWNELKGTSKESA |
M.Q.EFE.A...VK.LK....D.E.L..YS.YKQAT.GD.N...P.....K..AKW.AWN..KG.SK..A | |
Retrocopy | MCQVEFELACAAVKQLKNPMSDQEKLQLYSLYKQATQGDCNIPEPPTSEVKATAKWEAWNKNKGMSKMDA |
Parental | MRAYVDKVEELKQ |
MR.YV.KVEELK. | |
Retrocopy | MRNYVAKVEELKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 172 .52 RPM |
SRP017611_kidney | 0 .00 RPM | 258 .46 RPM |
SRP017611_liver | 0 .00 RPM | 132 .11 RPM |
Species | RetrogeneDB ID |
---|---|
Macaca mulatta | retro_mmul_168 |
Bos taurus | retro_btau_154 |
Sus scrofa | retro_sscr_41 |
Canis familiaris | retro_cfam_134 |
Equus caballus | retro_ecab_14 |