RetrogeneDB ID: | retro_ogar_2225 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873604.1:6352378..6352651(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000026116 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TPT1 | ||
Ensembl ID: | ENSOGAG00000012523 | ||
Aliases: | None | ||
Description: | tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022] |
Percent Identity: | 92.31 % |
Parental protein coverage: | 52.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDY |
.F..E.YKKYIKD.MKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFF.GENMNPDGMVALLDY | |
Retrocopy | TFIQEVYKKYIKDCMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFTGENMNPDGMVALLDY |
Parental | REDGVTPYMIFFKDGLEMEKC |
REDGV.PYMIFFKDGLEMEKC | |
Retrocopy | REDGVAPYMIFFKDGLEMEKC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |