RetrogeneDB ID: | retro_lafr_484 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_19:11821459..11821848(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000021740 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.87 % |
Parental protein coverage: | 81.4 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | DGLCLEGGKGKMVSRTEGNIDDSLIGGNASAEGPDGEGTESTVITGVDIVINHHLQETSFTKEAYKKYIK |
.GLCLE....K.V.RTE.NI.DSLIGG..S.E.P.....ESTVITGV.I..NH..QETSFT..AYKK.IK | |
Retrocopy | EGLCLEV*R-KTVCRTESNIGDSLIGGSTSTESPK----ESTVITGVNIAMNHQVQETSFTNKAYKKHIK |
Parental | DYMKSIKGKLEEQKPERVKPFMTGAAEQIKHILANFK-NYQFFIGENMNPDGMVALLDYREDGVTPYMIF |
DY.KS.K.K..E....R.KPFM.G..EQIKH.LAN.K.....FIGENM.PDGMV.LLD..E..V....I. | |
Retrocopy | DYKKS-KAKRPE----RIKPFMAGVTEQIKHNLANSK<KVKLFIGENMKPDGMVSLLD*GESDVNLFIIL |
Parental | F |
. | |
Retrocopy | W |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |