RetrogeneDB ID: | retro_pvam_165 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_1717:265567..265826(+) | ||
Located in intron of: | ENSPVAG00000017832 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFV | ||
Ensembl ID: | ENSPVAG00000001109 | ||
Aliases: | None | ||
Description: | H2A histone family, member V [Source:HGNC Symbol;Acc:20664] |
Percent Identity: | 70.79 % |
Parental protein coverage: | 66.41 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | LKTRTTSHG-RVGATAAVYSAAILEYLTAEVLELAGNASKD-LKVKRITPRHLQLA-IRGDEELDSLIKA |
..T.TTSHG..VG.T.AVYSA.ILEYLTAE..ELAGNASKD.LK.K...P.......I.GDEELDSLIKA | |
Retrocopy | INT*TTSHG*CVGTTTAVYSATILEYLTAEICELAGNASKD<LKGKAC*PSSFETCYICGDEELDSLIKA |
Parental | TIAGGGVIPHIH-KSLIGK |
T.AGGGVIPHIH..SLIGK | |
Retrocopy | TTAGGGVIPHIH<QSLIGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |