RetrogeneDB ID: | retro_tbel_4479 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_85052:644..1132(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000015946 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.24 % |
Parental protein coverage: | 55.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | DPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKVAGSLGLTWWMLAREVLRMRGTISREHPW |
DPRADHQPLTE.SYVNLPTIAL.NTDSPLRYVDIAIPCNNK.A.S.GL.WWMLAREVL.MRGTISREHPW | |
Retrocopy | DPRADHQPLTEVSYVNLPTIALSNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLCMRGTISREHPW |
Parental | EVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWAAP-APEFTATQPEVADWSEGRQVPSVPIQQFPT |
EVMPDLYFYRDPEEIEKEEQAA.EKAVTKEE.QGEW.AP..PEFTATQPEV.DWSEG.QVPSVPIQQFPT | |
Retrocopy | EVMPDLYFYRDPEEIEKEEQAAVEKAVTKEECQGEWTAP<SPEFTATQPEVTDWSEGVQVPSVPIQQFPT |
Parental | GDWSAQPATEDWSAAPTAQATEWA |
.DWSAQPATEDWSAAPTAQATEW. | |
Retrocopy | EDWSAQPATEDWSAAPTAQATEWS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |