RetrogeneDB ID: | retro_tbel_3272 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_135582:64212..64745(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000015946 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.94 % |
Parental protein coverage: | 60.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EPRLLVVTDPRADHQPLTEASYVNLPTIALC-NTDSPLRYVDIAIPCNNKVAGSLGLTWWMLAREVLRMR |
EPRLLVVT..RAD.QPLTEASYVNLPTIALC..TDSPL..VDIAI.CNNK.A.S.GL.WWMLAREVLRMR | |
Retrocopy | EPRLLVVTGLRADPQPLTEASYVNLPTIALC<HTDSPLLCVDIAILCNNKGAHSVGLMWWMLAREVLRMR |
Parental | GTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWAAPAPEFTATQPEVADWSEGRQVPS |
GTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKA.TKEEFQGEW.APAPEFTATQPEVADWSEG.QVPS | |
Retrocopy | GTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKALTKEEFQGEWTAPAPEFTATQPEVADWSEGVQVPS |
Parental | VPIQQFPTGDWSAQPATEDWSAAPTAQATEWAGTTTEWS |
VPIQQFPT.DWSAQPATEDWSAAPTAQATE..GTTTEWS | |
Retrocopy | VPIQQFPTEDWSAQPATEDWSAAPTAQATERVGTTTEWS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |