RetrogeneDB ID: | retro_tbel_496 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2239:109623..110506(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000015946 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.21 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIEN |
M.G.LDVLQ.KEEDVLKFLA.GTH.GGTNLDFQMEQY.YKRKSDGI.I..LKRT.EKLLLAARAIVAIEN | |
Retrocopy | MFGVLDVLQIKEEDVLKFLATGTHVGGTNLDFQMEQYVYKRKSDGISIVHLKRT*EKLLLAARAIVAIEN |
Parental | PADVSVISSRNTGXRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYV |
PADVSVISSRNTG.R..LKF.AATG.TPI.G.FTPGTF.NQIQ.AFREPRLLVVTDPRADHQPLTEASYV | |
Retrocopy | PADVSVISSRNTGQRDSLKFTAATGTTPIVGCFTPGTFSNQIQMAFREPRLLVVTDPRADHQPLTEASYV |
Parental | NLPTIALCNTDSPLRYVDIAIPCNNKVAGSL-GLTWWMLAR-EVLRMRGTISREHPWEVMPDLYFYRDPE |
N.P.IALCNTDSPL.YVDIAIP.NNK.A.S..GL.WWMLAR.EVLR...TIS.EHPWEVMPDLYFYRDPE | |
Retrocopy | NPPPIALCNTDSPLCYVDIAIPYNNKGAHSV<GLMWWMLAR<EVLRRHDTISHEHPWEVMPDLYFYRDPE |
Parental | EIEKEEQAAAEKAVTKEEFQGEWAAPAPEFTATQPEVADWSEGRQVPSVPIQQFPTGDWSAQPATEDWSA |
EIEKEEQAAAEKAVTKEEFQGEW.APAPEFTATQPEV.DWSEG.QVPSVPIQQFPT.DWSAQPATEDWSA | |
Retrocopy | EIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVVDWSEGVQVPSVPIQQFPTEDWSAQPATEDWSA |
Parental | APTAQATEWAGTTTEWS |
APTAQATEW.GTTTEWS | |
Retrocopy | APTAQATEWVGTTTEWS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |