RetrogeneDB ID: | retro_tbel_916 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3309:163824..164451(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000015946 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.38 % |
Parental protein coverage: | 71.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | RAVLKFAAATGATPIAG-RFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSP |
RAVLKFAAA.GATPIAG..FTPGTFTNQIQAAFREPRLLVVTDPRAD.QPLTEASYVN.PTIALCNTDSP | |
Retrocopy | RAVLKFAAAPGATPIAG<SFTPGTFTNQIQAAFREPRLLVVTDPRADPQPLTEASYVNPPTIALCNTDSP |
Parental | LRYVDIAIPCNNKVAGSLGLTWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVT |
LR.VDIA..CN.K...S.GL..WMLAREVL.MRGT.S.EHPWEVMPDLYFYRDPEE.EKEEQAAAEKAVT | |
Retrocopy | LRCVDIATACN-KGTHSAGLMRWMLAREVLHMRGTLSHEHPWEVMPDLYFYRDPEEVEKEEQAAAEKAVT |
Parental | KEEFQGEWAAPAPEFTATQPEVADWSEGRQVPS-VPIQQFPTGDWSAQP-ATEDWSAAPTAQATEWAGTT |
KEEFQGEWAAPAPEFTATQPEVADWSEG.QVPS.VPIQQFPT.DWSAQP..T.DWSAAPTAQATE..GTT | |
Retrocopy | KEEFQGEWAAPAPEFTATQPEVADWSEGVQVPS<VPIQQFPTEDWSAQP<STKDWSAAPTAQATERVGTT |
Parental | TEWS |
TEWS | |
Retrocopy | TEWS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |