RetrogeneDB ID: | retro_tsyr_1338 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_404082:659..972(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTSYG00000003649 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 74.77 % |
Parental protein coverage: | 82.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | AVKKLVAKGGKKKK-QVLKFTLDCTHPVEDGIMDAAN-FEQFLQERIKVNGKAGNLGGGVVTIERS-KSK |
A.KKLV.KGG.....QVLK.TLDCTHPV.DGI.DAAN.FE.FLQERIKVNG.AGNLGGG..TIER..KSK | |
Retrocopy | AMKKLVGKGGXXXX<QVLKCTLDCTHPVVDGIVDAAN<FEWFLQERIKVNGRAGNLGGGALTIERA<KSK |
Parental | ITVTSEVPFSKRY-LKYLTKKYLK-TNNLRDWLRVVANSKE |
ITVTSEVPFSKR..LKYLT..YLK..N.LRDWL...AN.KE | |
Retrocopy | ITVTSEVPFSKRV<LKYLTENYLK<DNHLRDWLCIIANNKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |