RetrogeneDB ID: | retro_tsyr_219 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_5637:108415..108763(+) | ||
Located in intron of: | ENSTSYG00000009695 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTSYG00000003649 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 81.51 % |
Parental protein coverage: | 90.7 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | GKKKKQVLKFTLD-CTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF-S |
G.KKKQVLKFTLD.CTHP.EDG.MDAAN.EQFLQE.IKVN.KAG.LG.G...IE.SKSKITVTSEVPF.S | |
Retrocopy | GAKKKQVLKFTLD>CTHPIEDGVMDAANSEQFLQEKIKVNRKAGDLGEGGCNIEMSKSKITVTSEVPF<S |
Parental | KRYLKYLTKKYLKTNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
KRYLKYLTKKYLK.NNL.DWL..VANSK.SY.LRYFQINQD.EEE.DED | |
Retrocopy | KRYLKYLTKKYLK-NNLHDWLHIVANSKKSYKLRYFQINQDKEEEMDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |