Parental gene: | ENSACAG00000013688 |
| Aliases: | None |
| Description: | None |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | 6:62293797..62314400(+) |
>ENSACAG00000013688
ATGGCCTCCCTCCTCAAGGTGGACCCGGAAGTGAAGATCAAGGTAGACTCTTTCAGGGAGCGAATCACAGGGGAAGCTGA
AGATCTAGTAGCTAATTTTTTCCCAAAGAAGCTTTTAGAACTTGATGCTTTCCTTAAGGATCCTATACTGAACATTCATG
ATCTCACCCAAATCCACTCAGATATGAACCTTCCTGTCCCTGACCCAATCCTGCTCACAAACAGTCATGATGGACTGGAT
GGGCCCAACCTGAAAAAGAGAAAACTGGAAGAATGTGAAGAGACCTTCCAGGGTACCAAAGTCTTTGTCATGCCTAATGG
GATGCTGAAGAGCAACCAACAGCTGGTGGACATCATTGAGAAGGTGAAACCCGAGATCCGACTGCTGATTGAGAAATGCA
ACACGGTCAAAATGTGGGTGCAGCTATTGATTCCCAGGATAGAAGATGGCAACAATTTTGGTGTTTCTATTCAGGAAGAA
ACTGTGGCTGAGCTCCGGACCGTGGAGAGTGAGGCAGCTTCATACTTGGACCAGATCTCTAGATATTATATCACACGGGC
AAAGCTGGTTTCTAAAATAGCAAAATATCCTCATGTGGAGGATTACCGTCGCACAGTGACAGAGATGGATGAAAAGGAAT
ATATCAGTCTGCGGCTCATCATTTCAGAGCTGAGAAATCAATACGTGACCCTGCACGACATGATCCTAAAGAACATTGAG
AAGATCAAGCGACCCCGGAGCAGCAATGCAGAGACTCTCTACTGA
ATGGCCTCCCTCCTCAAGGTGGACCCGGAAGTGAAGATCAAGGTAGACTCTTTCAGGGAGCGAATCACAGGGGAAGCTGA
AGATCTAGTAGCTAATTTTTTCCCAAAGAAGCTTTTAGAACTTGATGCTTTCCTTAAGGATCCTATACTGAACATTCATG
ATCTCACCCAAATCCACTCAGATATGAACCTTCCTGTCCCTGACCCAATCCTGCTCACAAACAGTCATGATGGACTGGAT
GGGCCCAACCTGAAAAAGAGAAAACTGGAAGAATGTGAAGAGACCTTCCAGGGTACCAAAGTCTTTGTCATGCCTAATGG
GATGCTGAAGAGCAACCAACAGCTGGTGGACATCATTGAGAAGGTGAAACCCGAGATCCGACTGCTGATTGAGAAATGCA
ACACGGTCAAAATGTGGGTGCAGCTATTGATTCCCAGGATAGAAGATGGCAACAATTTTGGTGTTTCTATTCAGGAAGAA
ACTGTGGCTGAGCTCCGGACCGTGGAGAGTGAGGCAGCTTCATACTTGGACCAGATCTCTAGATATTATATCACACGGGC
AAAGCTGGTTTCTAAAATAGCAAAATATCCTCATGTGGAGGATTACCGTCGCACAGTGACAGAGATGGATGAAAAGGAAT
ATATCAGTCTGCGGCTCATCATTTCAGAGCTGAGAAATCAATACGTGACCCTGCACGACATGATCCTAAAGAACATTGAG
AAGATCAAGCGACCCCGGAGCAGCAATGCAGAGACTCTCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 19 .89 RPM |
| SRP009831_brain | 18 .32 RPM |
| SRP009831_dewlap | 39 .95 RPM |
| SRP009831_embryo | 69 .86 RPM |
| SRP009831_heart | 24 .80 RPM |
| SRP009831_liver | 19 .76 RPM |
| SRP009831_lung | 16 .93 RPM |
| SRP009831_ovary | 46 .06 RPM |
| SRP009831_skeletal_muscle | 34 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019918 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013111 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012552 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000012620 | ortholog_many2many | 2 retrogenes | |
| Homo sapiens | ENSG00000131467 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000013446 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010027 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015986 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008372 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009225 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017385 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028833 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_37 | 74.80 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_acar_118 | 84.35 | 57.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000013688 retrocopies