Parental gene:

PRDX4, ENSBTAG00000006165

Aliases:None
Description:Peroxiredoxin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9BGI2]
Organism:Cow (Bos taurus)
Coordinates:X:126551744..126564689(-)


>ENSBTAG00000006165
ATGGAGGCGCCGCCGCCGCCGCCGCCGCTACCCGCGACGACTCTGGCCCCTGGCCGGAGCCGAAAGCTCCTGCTACTACC
TCTGCTGCTGTTCTTGCTGCGGGCCGAAGCTGTGCGGGGCTTCGAGGCGGAGGAGAGGCCCCGAACCCGCGAAGAGGAGT
GCCACTTCTACGCGGGTGGCCAAGTGTACCCGGGAGAGGTGTCCCGGGTTTCGGTCGCCGAACACTCCCTGCACCTCAGC
AAAGCCAAAATTTCCAAGCCAGCACCTTATTGGGAAGGAACAGCTGTGATAAATGGAGAATTTAAGGAGCTCAAGTTAAC
TGATTATCGTGGGAAGTACCTGGTTTTTTTCTTCTACCCACTTGATTTCACTTTTGTGTGTCCAACTGAAATCATCGCCT
TTGGTGATAGAATTGACGAATTCAGATCAATCAACACTGAAGTGGTAGCATGCTCTGTTGATTCACAGTTCACCCATTTG
GCCTGGATTAATACTCCTCGAAGACAAGGAGGACTTGGGTCAATAAATATTCCACTTCTTGCGGATTTGAACCATCAGAT
CTCAAAGGACTATGGCGTATATCTGGAAGACTCAGGCCACACTCTTAGAGGTCTCTTCATTATTGATGACAAGGGAATCC
TAAGACAGATTACTCTGAATGACCTTCCCGTGGGTAGATCCGTGGATGAGACACTACGTTTGGTTCAGGCATTCCAGTAC
ACTGACAAACACGGAGAAGTCTGCCCTGCTGGTTGGAAACCTGGTAGTGAAACAATAATCCCAGATCCAGCCGGAAAACT
GAAGTATTTCGATAAGCTGAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 13 .52 RPM
SRP017611_kidney 30 .29 RPM
SRP017611_liver 118 .17 RPM
ERP005899_muscle 80 .71 RPM
ERP005899_liver 34 .53 RPM
SRP030211_testis 76 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003642 within_species_paralog 2 retrogenes
retro_btau_1299, retro_btau_1446,
Bos taurus ENSBTAG00000008731 within_species_paralog 1 retrogene
retro_btau_562,
Cavia porcellus ENSCPOG00000004185 ortholog_one2one 1 retrogene
retro_cpor_353,
Equus caballus ENSECAG00000010085 ortholog_one2one 1 retrogene
retro_ecab_576,
Homo sapiens ENSG00000123131 ortholog_one2one 1 retrogene
retro_hsap_3165,
Gorilla gorilla ENSGGOG00000026790 ortholog_one2one 1 retrogene
retro_ggor_1351,
Myotis lucifugus ENSMLUG00000004904 ortholog_one2one 2 retrogenes
retro_mluc_2347, retro_mluc_2619,
Macaca mulatta ENSMMUG00000021366 ortholog_one2one 1 retrogene
retro_mmul_2001,
Tupaia belangeri ENSTBEG00000004454 ortholog_one2one 5 retrogenes
retro_tbel_2164, retro_tbel_2467, retro_tbel_2522, retro_tbel_2811, retro_tbel_2978,
Tarsius syrichta ENSTSYG00000000602 ortholog_one2one 1 retrogene
retro_tsyr_404,
Tursiops truncatus ENSTTRG00000012368 ortholog_one2one 1 retrogene
retro_ttru_547,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_439 52.91 61.68
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Download FASTA sequences of all ENSBTAG00000006165 retrocopies