Parental gene:

VDAC5P, ENSBTAG00000014068

Aliases:VDAC3, VDAC1P5, VDAC5P
Description:Voltage-dependent anion-selective channel protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9MZ13]
Organism:Cow (Bos taurus)
Coordinates:27:36921291..36933273(+)


>ENSBTAG00000014068
ATGTGTAACACACCGACTTACTGTGACCTAGGAAAGGCTGCCAAAGATGTCTTCAACAAAGGATATGGATTTGGCATGGT
CAAAATAGATCTGAGAACCAAGTCATGTAGTGGAGTGATGGAATTTTCTACTTCTGGTCATGCTTACACTGATACAGGGA
AAGCATCAGGCAACCTAGAGACCAAATACAAGATCTGTAACTATGGACTGACCTTCACGCAGAAGTGGAACACAGACAAT
ACTCTTGGGACAGAAATCTCTTGGGAGAATAAGTTGGCTGAAGGGTTGAAACTGACTCTTGATACCATATTTGTACCGAA
CACAGGAAAGAAGAGTGGGAAATTGAAGGCCTCATATAAACGGGATTGTTTCAGTCTTGGCAGTAATGTTGATATAGATT
TTTCAGGACCAACCATCTATGGCTGGGCTGTGTTGGCCTTTGAAGGTTGGCTTGCTGGCTATCAGATGAGTTTTGACACA
GCCAAATCCAAACTGTCACAGAATAATTTCGCCCTGGGTTACAAGGCCGCAGACTTCCAGCTGCACACTCATGTGAATGA
TGGCACTGAGTTTGGAGGGTCCATCTACCAGAAGGTGAATGAGAAGATTGAAACGTCGATAAACCTCGCGTGGACAGCTG
GCAGTAACAACACCCGCTTCGGCATCGCTGCTAAGTACAAGCTGGACTGCAGAACTTCTCTCTCTGCTAAAGTAAACAAT
GCCAGCCTGATTGGACTGGGTTACACTCAGACCCTTCGACCAGGAGTGAAACTGACCCTGTCAGCTCTAATTGATGGAAA
GAACTTCAATGCAGGAGGGCACAAGGTCGGTCTGGGATTTGAACTAGAAGCTTAA

Library Parental gene expression (RPM)
ERP005899_liver 57 .53 RPM
ERP005899_muscle 212 .11 RPM
SRP017611_brain 100 .81 RPM
SRP017611_kidney 126 .49 RPM
SRP017611_liver 42 .28 RPM
SRP030211_testis 361 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005095 possible_ortholog 1 retrogene
retro_amel_729,
Bos taurus ENSBTAG00000012975 within_species_paralog 2 retrogenes
retro_btau_1252, retro_btau_1389,
Canis familiaris ENSCAFG00000005502 possible_ortholog 5 retrogenes
retro_cfam_1513, retro_cfam_2146, retro_cfam_258, retro_cfam_665, retro_cfam_713,
Choloepus hoffmanni ENSCHOG00000007369 possible_ortholog 1 retrogene
retro_chof_16,
Dasypus novemcinctus ENSDNOG00000013885 possible_ortholog 1 retrogene
retro_dnov_1753,
Equus caballus ENSECAG00000000438 possible_ortholog 1 retrogene
retro_ecab_799,
Echinops telfairi ENSETEG00000002652 ortholog_one2many 2 retrogenes
retro_etel_1456, retro_etel_1487,
Felis catus ENSFCAG00000010075 possible_ortholog 2 retrogenes
retro_fcat_1985, retro_fcat_599,
Homo sapiens ENSG00000078668 possible_ortholog 1 retrogene
retro_hsap_1375,
Gallus gallus ENSGALG00000003755 ortholog_one2many 1 retrogene
retro_ggal_11,
Gorilla gorilla ENSGGOG00000001932 possible_ortholog 2 retrogenes
retro_ggor_1071, retro_ggor_3043,
Microcebus murinus ENSMICG00000010235 possible_ortholog 1 retrogene
retro_mmur_1361,
Monodelphis domestica ENSMODG00000015526 ortholog_many2many 5 retrogenes
retro_mdom_1130, retro_mdom_1331, retro_mdom_1869, retro_mdom_420, retro_mdom_669,
Mus musculus ENSMUSG00000008892 possible_ortholog 2 retrogenes
retro_mmus_110, retro_mmus_1505,
Nomascus leucogenys ENSNLEG00000012890 possible_ortholog 1 retrogene
retro_nleu_2593,
Otolemur garnettii ENSOGAG00000016163 possible_ortholog 4 retrogenes
retro_ogar_2770, retro_ogar_2870, retro_ogar_589, retro_ogar_995,
Pongo abelii ENSPPYG00000018554 possible_ortholog 8 retrogenes
retro_pabe_1145, retro_pabe_1960, retro_pabe_2304, retro_pabe_3163, retro_pabe_3665, retro_pabe_3791, retro_pabe_819, retro_pabe_971,
Pan troglodytes ENSPTRG00000020205 possible_ortholog 2 retrogenes
retro_ptro_2548, retro_ptro_945,
Pteropus vampyrus ENSPVAG00000014822 possible_ortholog 2 retrogenes
retro_pvam_637, retro_pvam_907,
Rattus norvegicus ENSRNOG00000019277 possible_ortholog 1 retrogene
retro_rnor_1596,
Sarcophilus harrisii ENSSHAG00000017953 ortholog_one2many 1 retrogene
retro_shar_658,
Tupaia belangeri ENSTBEG00000007420 possible_ortholog 4 retrogenes
retro_tbel_1801, retro_tbel_2150, retro_tbel_2261, retro_tbel_884,
Tarsius syrichta ENSTSYG00000007112 possible_ortholog 1 retrogene
retro_tsyr_918,
Tursiops truncatus ENSTTRG00000009681 ortholog_one2many 3 retrogenes
retro_ttru_1201, retro_ttru_1254, retro_ttru_634,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_365 89.75 99.65
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2. retro_btau_685 82.55 51.94
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3. retro_btau_1537 87.50 70.67
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4. retro_btau_1607 74.86 64.08
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Download FASTA sequences of all ENSBTAG00000014068 retrocopies