Parental gene: | VDAC1P5, ENSPPYG00000018554 |
| Aliases: | VDAC1P5, VDAC3, VDAC5P |
| Description: | voltage-dependent anion-selective channel protein 3 [Source:RefSeq peptide;Acc:NP_001127515] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:42905669..42919110(+) |
>ENSPPYG00000018554
ATGTGTAACACACCAACTTACTGTGACCTAGGAAAGGCTGCTAAGGATGTCTTCAACAAAGGATATGGCTTTGGCATGGT
CAAGATAGACCTGAAAACCAAGTCTTGTAGTGGAGTGGAATTTTCTACTTCTGGTCATGCTTACACTGATACAGGGAAAG
CATCAGGCAACCTAGAAACCAAATATAAGGTCTGTAACTATGGACTTACCTTCACCCAAAAATGGAACACAGACAATACT
CTAGGAACAGAAATCTCTTGGGAGAATAAGTTGGCTGAAGGGTTGAAACTGACTCTTGATACCATATTTGTACCGAACAC
AGGAAAGAAGAGTGGGAAATTGAAGGCCTCCTATAAACGGGATTGTTTTAGTGTTGGCAGTAATGTTGATATAGATTTTT
CTGGACCAACCATCTATGGCTGGGCTGTGTTGGCTTTCGAAGGGTGGCTTGCTGGCTATCAGATGAGTTTTGACACAGCC
AAATCCAAACTGTCACAGAATAATTTCGCCCTGGGTTACAAGGCTGCGGACTTCCAGCTGCACACACATGTGAATGATGG
CACTGAATTTGGAGGTTCTATCTACCAGAAGGTGAATGAGAAGATTGAAACATCCATAAACCTTGCTTGGACAGCTGGGA
GTAACAACACCCGTTTTGGCATTGCTGCTAAGTACATGCTGGATTGTAGAACTTCTCTCTCTGCTAAAGTAAATAATGCC
AGCCTGATTGGACTGGGTTATACTCAGACCCTTCGACCAGGAGTCAAATTGACTTTATCAGCTTTAATCGATGGGAAGAA
CTTCAGTGCAGGAGGTCACAAGGTTGGCTTGGGATTTGAACTGGAAGCTTAA
ATGTGTAACACACCAACTTACTGTGACCTAGGAAAGGCTGCTAAGGATGTCTTCAACAAAGGATATGGCTTTGGCATGGT
CAAGATAGACCTGAAAACCAAGTCTTGTAGTGGAGTGGAATTTTCTACTTCTGGTCATGCTTACACTGATACAGGGAAAG
CATCAGGCAACCTAGAAACCAAATATAAGGTCTGTAACTATGGACTTACCTTCACCCAAAAATGGAACACAGACAATACT
CTAGGAACAGAAATCTCTTGGGAGAATAAGTTGGCTGAAGGGTTGAAACTGACTCTTGATACCATATTTGTACCGAACAC
AGGAAAGAAGAGTGGGAAATTGAAGGCCTCCTATAAACGGGATTGTTTTAGTGTTGGCAGTAATGTTGATATAGATTTTT
CTGGACCAACCATCTATGGCTGGGCTGTGTTGGCTTTCGAAGGGTGGCTTGCTGGCTATCAGATGAGTTTTGACACAGCC
AAATCCAAACTGTCACAGAATAATTTCGCCCTGGGTTACAAGGCTGCGGACTTCCAGCTGCACACACATGTGAATGATGG
CACTGAATTTGGAGGTTCTATCTACCAGAAGGTGAATGAGAAGATTGAAACATCCATAAACCTTGCTTGGACAGCTGGGA
GTAACAACACCCGTTTTGGCATTGCTGCTAAGTACATGCTGGATTGTAGAACTTCTCTCTCTGCTAAAGTAAATAATGCC
AGCCTGATTGGACTGGGTTATACTCAGACCCTTCGACCAGGAGTCAAATTGACTTTATCAGCTTTAATCGATGGGAAGAA
CTTCAGTGCAGGAGGTCACAAGGTTGGCTTGGGATTTGAACTGGAAGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 93 .83 RPM |
| SRP007412_cerebellum | 124 .15 RPM |
| SRP007412_heart | 133 .06 RPM |
| SRP007412_kidney | 35 .57 RPM |
| SRP007412_liver | 38 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005095 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000014068 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000005502 | ortholog_one2one | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000007369 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013885 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000000438 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000010075 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000078668 | ortholog_one2one | 1 retrogene | |
| Gallus gallus | ENSGALG00000003755 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001932 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000010235 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015526 | ortholog_one2many | 5 retrogenes | |
| Mus musculus | ENSMUSG00000008892 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012890 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016163 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000015781 | within_species_paralog | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000020205 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014822 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019277 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017953 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007420 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007112 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_819 | 54.02 | 61.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_971 | 53.45 | 61.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1145 | 88.17 | 92.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1960 | 52.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2304 | 52.30 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3163 | 58.49 | 56.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3665 | 66.53 | 87.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3791 | 61.02 | 82.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018554 retrocopies