Parental gene: | PRPS2, ENSCAFG00000011662 |
| Aliases: | None |
| Description: | phosphoribosyl pyrophosphate synthetase 2 [Source:HGNC Symbol;Acc:9465] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | X:9281780..9315989(+) |
>ENSCAFG00000011662
ATGCCCAACATCGTGCTCTTCAGCGGTAGCTCGCACCAGGACCTGTCCCAGCGCGTGGCCGACCGGCTGGGCCTGGAACT
GGGCAAGGTGGTCACTAAGAAGTTCAGCAACCAGGAGACCAGCGTCGAGATCGGTGAAAGCGTGAGGGGCGAAGATGTCT
ACATCATCCAGAGCGGCTGTGGAGAAATCAATGACAACCTGATGGAGCTCCTCATCATGATCAACGCCTGCAAGATCGCG
TCATCATCCAGGGTGACTGCCGTCATCCCGTGTTTTCCATACGCCCGACAGGATAAGAAGGACAAGAGCCGAGCTCCGAT
TTCTGCGAAACTTGTGGCCAATATGCTCTCGGTCGCTGGGGCCGATCACATCATCACCATGGACCTGCATGCTTCTCAGA
TCCAGGGCTTCTTTGACATCCCGGTGGATAACCTGTACGCGGAGCCCGCCGTCCTGCAGTGGATCCGAGAGAACATTGCT
GAGTGGAGGAACTGTATCATTGTCTCGCCCGACGCCGGGGGAGCCAAGAGGGTCACGTCGATTGCAGACAGGTTGAATGT
GGAATTCGCCTTGATTCACAAAGAGAGGAAGAAAGCAAATGAAGTGGACCGGATGGTTCTGGTGGGCGACGTGAAGGACC
GCGTGGCTATCCTCGTGGACGACATGGCTGACACCTGTGGCACCATCTGCCACGCCGCGGACAAGCTGCTCTCCGCCGGA
GCCACCAAGGTTTATGCTATCCTTACACACGGGATCTTCTCTGGGCCAGCTATTTCCAGAATAAACAACGCTGCCTTTGA
GGCTGTTGTCGTCACAAACACCATTCCGCAAGAGGACAAAATGAAACACTGTCCCAAGATTCAGGTCATTGATATCTCGA
TGATCTTGGCAGAGGCGATCCGAAGAACGCACAACGGTGAATCCGTGTCCTACCTGTTCAGCCACGTCCCGCTATAG
ATGCCCAACATCGTGCTCTTCAGCGGTAGCTCGCACCAGGACCTGTCCCAGCGCGTGGCCGACCGGCTGGGCCTGGAACT
GGGCAAGGTGGTCACTAAGAAGTTCAGCAACCAGGAGACCAGCGTCGAGATCGGTGAAAGCGTGAGGGGCGAAGATGTCT
ACATCATCCAGAGCGGCTGTGGAGAAATCAATGACAACCTGATGGAGCTCCTCATCATGATCAACGCCTGCAAGATCGCG
TCATCATCCAGGGTGACTGCCGTCATCCCGTGTTTTCCATACGCCCGACAGGATAAGAAGGACAAGAGCCGAGCTCCGAT
TTCTGCGAAACTTGTGGCCAATATGCTCTCGGTCGCTGGGGCCGATCACATCATCACCATGGACCTGCATGCTTCTCAGA
TCCAGGGCTTCTTTGACATCCCGGTGGATAACCTGTACGCGGAGCCCGCCGTCCTGCAGTGGATCCGAGAGAACATTGCT
GAGTGGAGGAACTGTATCATTGTCTCGCCCGACGCCGGGGGAGCCAAGAGGGTCACGTCGATTGCAGACAGGTTGAATGT
GGAATTCGCCTTGATTCACAAAGAGAGGAAGAAAGCAAATGAAGTGGACCGGATGGTTCTGGTGGGCGACGTGAAGGACC
GCGTGGCTATCCTCGTGGACGACATGGCTGACACCTGTGGCACCATCTGCCACGCCGCGGACAAGCTGCTCTCCGCCGGA
GCCACCAAGGTTTATGCTATCCTTACACACGGGATCTTCTCTGGGCCAGCTATTTCCAGAATAAACAACGCTGCCTTTGA
GGCTGTTGTCGTCACAAACACCATTCCGCAAGAGGACAAAATGAAACACTGTCCCAAGATTCAGGTCATTGATATCTCGA
TGATCTTGGCAGAGGCGATCCGAAGAACGCACAACGGTGAATCCGTGTCCTACCTGTTCAGCCACGTCCCGCTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .18 RPM |
| SRP017611_kidney | 21 .20 RPM |
| SRP017611_liver | 6 .02 RPM |
| SRP012049_cerebellum | 6 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017976 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003885 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005166 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000026323 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017334 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016087 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000001197 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020125 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000009452 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007710 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006056 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009917 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003226 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1037 | 94.65 | 76.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1433 | 71.57 | 63.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000011662 retrocopies