Parental gene: | ENSMODG00000017334 |
| Aliases: | None |
| Description: | Ribose-phosphate pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:F6WVR9] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 7:28574169..28608336(-) |
>ENSMODG00000017334
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCACCAGGACCTGTCCCAGAAAGTGGCGGACAGATTGGGACTGGAACT
GGGCAAGGTAGTCACTAAGAAATTCAGCAATCAGGAGACCAGTGTAGAAATCGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATTATCCAAAGTGGCTGTGGGGAAATTAATGATAACTTGATGGAACTTCTCATTATGATCAATGCTTGCAAAATTGCA
TCATCATCCAGGGTGACTGCAGTGATCCCATGTTTTCCATATGCCCGACAAGATAAAAAAGACAAGAGTCGTGCTCCAAT
TTCTGCAAAACTTGTGGCTAATATGCTTTCCGTGGCTGGGGCTGATCATATCATTACAATGGATCTCCATGCTTCTCAGA
TACAGGGATTTTTTGATATTCCAGTGGATAATTTGTATGCAGAACCTGCAGTCTTACAGTGGATTCGAGAAAATATTGCA
GAATGGAGGAATTGTATCATTGTGTCTCCAGATGCTGGTGGAGCTAAAAGAGTGACATCAATTGCTGACAGACTGAATGT
GGAGTTTGCTTTGATTCATAAAGAAAGAAAGAAGGCAAATGAAGTAGACAGGATGGTTTTGGTTGGTGACGTGAAGGATC
GTGTAGCCATCCTTGTGGATGACATGGCTGATACATGTGGCACAATATGCCATGCTGCAGACAAGTTACTGTCTGCTGGA
GCCACCAAAGTTTATGCAATTCTGACTCATGGAATCTTCTCTGGGCCAGCTATTTCTAGGATTAATAATGCGGCATTTGA
GGCTGTGGTGGTCACAAATACAATTCCACAAGAAGACAAAATGAAGCACTGCTCTAAAATCCAGGTTATTGACATTTCAA
TGATACTGGCTGAAGCAATACGGAGAACACACAATGGTGAATCTGTATCTTATCTGTTCAGTCATGTTCCACTATAA
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCACCAGGACCTGTCCCAGAAAGTGGCGGACAGATTGGGACTGGAACT
GGGCAAGGTAGTCACTAAGAAATTCAGCAATCAGGAGACCAGTGTAGAAATCGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATTATCCAAAGTGGCTGTGGGGAAATTAATGATAACTTGATGGAACTTCTCATTATGATCAATGCTTGCAAAATTGCA
TCATCATCCAGGGTGACTGCAGTGATCCCATGTTTTCCATATGCCCGACAAGATAAAAAAGACAAGAGTCGTGCTCCAAT
TTCTGCAAAACTTGTGGCTAATATGCTTTCCGTGGCTGGGGCTGATCATATCATTACAATGGATCTCCATGCTTCTCAGA
TACAGGGATTTTTTGATATTCCAGTGGATAATTTGTATGCAGAACCTGCAGTCTTACAGTGGATTCGAGAAAATATTGCA
GAATGGAGGAATTGTATCATTGTGTCTCCAGATGCTGGTGGAGCTAAAAGAGTGACATCAATTGCTGACAGACTGAATGT
GGAGTTTGCTTTGATTCATAAAGAAAGAAAGAAGGCAAATGAAGTAGACAGGATGGTTTTGGTTGGTGACGTGAAGGATC
GTGTAGCCATCCTTGTGGATGACATGGCTGATACATGTGGCACAATATGCCATGCTGCAGACAAGTTACTGTCTGCTGGA
GCCACCAAAGTTTATGCAATTCTGACTCATGGAATCTTCTCTGGGCCAGCTATTTCTAGGATTAATAATGCGGCATTTGA
GGCTGTGGTGGTCACAAATACAATTCCACAAGAAGACAAAATGAAGCACTGCTCTAAAATCCAGGTTATTGACATTTCAA
TGATACTGGCTGAAGCAATACGGAGAACACACAATGGTGAATCTGTATCTTATCTGTTCAGTCATGTTCCACTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011662 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003885 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007206 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000007577 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000005166 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000026323 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009171 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016087 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000001197 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020125 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000009452 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000007710 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006056 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009917 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003226 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_258 | 93.71 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_834 | 99.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1323 | 88.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1359 | 95.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000017334 retrocopies