Parental gene:

PRPS2, ENSSTOG00000006056

Aliases:None
Description:phosphoribosyl pyrophosphate synthetase 2 [Source:HGNC Symbol;Acc:9465]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393280.1:2547128..2574448(+)


>ENSSTOG00000006056
ATGCCCAACATCGTGCTTTTCAGCGGCAGCTCGCACCAGGACCTGTCCCAGCGTGTGGCCGACCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACCAAGAAGTTCAGTAACCAGGAGACCAGCGTCGAGATTGGTGAAAGTGTGAGAGGGGAAGATGTCT
ATATCATCCAGAGTGGCTGTGGAGAAATCAATGACAACCTGATGGAACTGCTCATCATGATCAATGCCTGCAAGATTGCC
TCATCATCCAGGGTGACTGCAGTGATCCCATGTTTTCCATATGCCCGACAAGATAAAAAGGACAAGAGTCGTGCTCCAAT
TTCTGCAAAACTTGTGGCTAACATGCTCTCAGTTGCTGGGGCTGATCACATCATCACCATGGATCTGCATGCCTCTCAGA
TACAGGGATTCTTTGATATTCCTGTGGATAACTTATACGCAGAGCCTGCAGTTCTGCAGTGGATTCGGGAGAATATCACA
GAGTGGAAGAACTGTATCATTGTTTCACCGGATGCAGGGGGAGCCAAGAGGGTCACATCAATTGCAGACAGGTTGAATGT
GGAATTTGCTTTGATTCACAAAGAGAGGAAGAAAGCAAATGAAGTGGATCGGATGGTTCTGGTGGGGGATGTGAAGGACC
GCGTAGCCATCCTCGTGGATGACATGGCTGACACGTGTGGTACCATCTGCCATGCTGCTGATAAACTGCTCTCAGCTGGG
GCCACTAAAGTTTATGCTATCCTTACTCATGGGATATTCTCTGGGCCAGCTATATCCAGAATCAATAATGCTTCCTTTGA
GGCTGTTGTTGTCACAAACACAATTCCGCAAGAGGACAAGATGAAACACTGCTCCAAGATTCAGGTGATTGACATTTCAA
TGATCCTGGCTGAGGCGATCCGAAGGACACACAATGGGGAATCCGTGTCTTATTTGTTCAGCCATGTGCCACTGTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011662 ortholog_one2one 2 retrogenes
retro_cfam_1037, retro_cfam_1433,
Callithrix jacchus ENSCJAG00000003885 ortholog_one2one 1 retrogene
retro_cjac_364,
Echinops telfairi ENSETEG00000005166 ortholog_one2one 2 retrogenes
retro_etel_1613, retro_etel_669,
Felis catus ENSFCAG00000026323 ortholog_one2many 1 retrogene
retro_fcat_527,
Monodelphis domestica ENSMODG00000017334 possible_ortholog 4 retrogenes
retro_mdom_1323, retro_mdom_1359, retro_mdom_258, retro_mdom_834,
Otolemur garnettii ENSOGAG00000016087 ortholog_one2one 1 retrogene
retro_ogar_1440,
Procavia capensis ENSPCAG00000001197 ortholog_one2one 2 retrogenes
retro_pcap_219, retro_pcap_292,
Pongo abelii ENSPPYG00000020125 ortholog_one2one 1 retrogene
retro_pabe_3431,
Pteropus vampyrus ENSPVAG00000009452 ortholog_one2one 1 retrogene
retro_pvam_1224,
Sorex araneus ENSSARG00000007710 ortholog_one2one 1 retrogene
retro_sara_18,
Ictidomys tridecemlineatus ENSSTOG00000007638 within_species_paralog 2 retrogenes
retro_itri_11, retro_itri_173,
Tupaia belangeri ENSTBEG00000009917 ortholog_one2one 1 retrogene
retro_tbel_1245,
Tursiops truncatus ENSTTRG00000003226 ortholog_one2one 1 retrogene
retro_ttru_1494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1668 76.32 58.18
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Download FASTA sequences of all ENSSTOG00000006056 retrocopies