Parental gene:

PRPS2, ENSCJAG00000003885

Aliases:None
Description:Ribose-phosphate pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:F6S8U8]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:10789794..10823226(+)


>ENSCJAG00000003885
ATGCCCAACATCGTGCTGTTTAGCGGCAGTTCGCACCAGGACCTGTCCCAGCGCGTCGCGGATCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACCAAGAAGTTCAGCAACCAGGAGACCAGCGTGGAGATTGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATCATCCAGAGCGGCTGTGGGGAAATTAACGACAATCTGATGGAGCTCCTCATCATGATCAATGCCTGCAAGATTGCG
TCATCATCCAGGGTGACTGCCGTGATCCCATGTTTCCCATACGCCCGACAAGATAAAAAAGACAAGAGTCGTGCTCCAAT
TTCTGCAAAACTTGTGGCCAATATGCTGTCGGTGGCTGGGGCGGATCACATCATCACCATGGACCTGCATGCTTCTCAGA
TACAGGGATTCTTCGATATTCCTGTGGATAATTTGTATGCGGAGCCCGCAGTCCTGCAGTGGATCCGGGAAAACATTGCG
GAGTGGAAGAACTGTATCATTGTTTCACCTGATGCAGGGGGAGCCAAAAGTATTTTGTCAGGGTCACGTCAAATTGCAGA
CAGGTTGAATGTGGAATTTGCCTTGATCCACAAGGAGAGGAAGAAGGCGAATGAAGTGGACCGGATGGTCCTGGTGGGCG
ACGTCAAGGACCGTGTGGCCATCCTCGTGGATGACATGGCTGACACCTGCGGCACCATCTGCCACGCTGCAGACAAGCTG
CTGTCAGCCGGAGCCACCAAAGTTTATGCTATCCTTACCCATGGGATCTTCTCCGGACCAGCTATTTCCAGAATAAATAA
TGCCGCCTTTGAGGCCGTTGTCGTCACAAACACAATTCCGCAAGAGGACAAAATGAAACACTGCACCAAGATTCAGGTCA
TTGACATTTCCATGATCTTGGCCGAAGCAATCCGAAGGACACACAATGGGGAATCTGTGTCCTACCTCTTCAGCCATGTC
CCGCTATAA

Library Parental gene expression (RPM)
SRP051959_spleen 52 .29 RPM
SRP051959_skeletal_muscle 2 .45 RPM
SRP051959_lymph_node 35 .11 RPM
SRP051959_lung 18 .97 RPM
SRP051959_liver 19 .45 RPM
SRP051959_kidney 43 .09 RPM
SRP051959_heart 5 .82 RPM
SRP051959_colon 21 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011662 ortholog_one2one 2 retrogenes
retro_cfam_1037, retro_cfam_1433,
Echinops telfairi ENSETEG00000005166 ortholog_one2one 2 retrogenes
retro_etel_1613, retro_etel_669,
Felis catus ENSFCAG00000026323 ortholog_one2many 1 retrogene
retro_fcat_527,
Monodelphis domestica ENSMODG00000017334 possible_ortholog 4 retrogenes
retro_mdom_1323, retro_mdom_1359, retro_mdom_258, retro_mdom_834,
Otolemur garnettii ENSOGAG00000016087 ortholog_one2one 1 retrogene
retro_ogar_1440,
Procavia capensis ENSPCAG00000001197 ortholog_one2one 2 retrogenes
retro_pcap_219, retro_pcap_292,
Pongo abelii ENSPPYG00000020125 ortholog_one2one 1 retrogene
retro_pabe_3431,
Pteropus vampyrus ENSPVAG00000009452 ortholog_one2one 1 retrogene
retro_pvam_1224,
Sorex araneus ENSSARG00000007710 ortholog_one2one 1 retrogene
retro_sara_18,
Ictidomys tridecemlineatus ENSSTOG00000006056 ortholog_one2one 1 retrogene
retro_itri_1668,
Tupaia belangeri ENSTBEG00000009917 ortholog_one2one 1 retrogene
retro_tbel_1245,
Tursiops truncatus ENSTTRG00000003226 ortholog_one2one 1 retrogene
retro_ttru_1494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_364 94.39 100.00
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Download FASTA sequences of all ENSCJAG00000003885 retrocopies