Parental gene:

ENSFCAG00000026323

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:X:9212092..9248104(+)


>ENSFCAG00000026323
ATGCCCAACATCGTGCTCTTCAGCGGCAGCTCGCACCAGGACCTGTCCCAGCGCGTGGCCGACCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACTAAGAAGTTCAGCAACCAGGAGACCAGCGTCGAGATCGGTGAGAGCGTGAGGGGCGAAGATGTCT
ACATCATCCAGAGTGGCTGTGGAGAAATCAACGACAACCTCATGGAGCTTCTCATCATGATCAACGCCTGTAAGATCGCG
TCATCTTCCAGGGTGACTGCTGTGATCCCGTGTTTTCCGTATGCTCGACAAGACAAAAAGGACAAGAGCCGTGCTCCGAT
TTCTGCGAAACTTGTGGCCAATATGCTGTCAGTGGCAGGGGCAGATCACATCATCACCATGGACCTGCACGCCTCTCAGA
TCCAGGGATTCTTTGACATCCCCGTGGATAATTTGTACGCGGAGCCTGCGGTCCTGCAGTGGATCCGGGAGAACATCGCC
GAGTGGAAGAACTGTATCATAGTTTCACCTGACGCCGGGGGAGCCAAAAGGGTCACCTCGATTGCGGACAGGCTGAATGT
GGAATTTGCCCTGATTCACAAAGAGAGGAAGAAAGCAAACGAAGTGGACCGGATGGTTCTGGTGGGCGACGTGAAGGACC
GCGTGGCCATCCTCGTGGACGACATGGCCGACACGTGTGGCACCATCTGCCATGCTGCGGACAAGCTACTGTCAGCTGGA
GCCACCAAAGTTTATGCTATCCTGACGCACGGGATCTTCTCTGGGCCAGCTATTTCCAGAATAAATAATGCCGCCTTTGA
AGCTGTTGTGGTCACAAACACCATTCCGCAAGAGGACAAAATGAGACACTGTCCCAAGATTCAGGTTATTGATATCTCGA
TGATCTTGGCAGAGGCGATCCGAAGAACACACAACGGTGAATCTGTGTCTTACCTGTTCAGCCACGTCCCGCTATAG

Library Parental gene expression (RPM)
SRP017611_brain 12 .62 RPM
SRP017611_kidney 70 .49 RPM
SRP017611_liver 11 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011662 ortholog_one2many 2 retrogenes
retro_cfam_1037, retro_cfam_1433,
Callithrix jacchus ENSCJAG00000003885 ortholog_one2many 1 retrogene
retro_cjac_364,
Cavia porcellus ENSCPOG00000007206 possible_ortholog 1 retrogene
retro_cpor_16,
Dipodomys ordii ENSDORG00000007577 possible_ortholog 2 retrogenes
retro_dord_223, retro_dord_605,
Echinops telfairi ENSETEG00000005166 ortholog_one2many 2 retrogenes
retro_etel_1613, retro_etel_669,
Felis catus ENSFCAG00000012286 within_species_paralog 1 retrogene
retro_fcat_394,
Monodelphis domestica ENSMODG00000017334 possible_ortholog 4 retrogenes
retro_mdom_1323, retro_mdom_1359, retro_mdom_258, retro_mdom_834,
Otolemur garnettii ENSOGAG00000016087 ortholog_one2many 1 retrogene
retro_ogar_1440,
Procavia capensis ENSPCAG00000001197 ortholog_one2many 2 retrogenes
retro_pcap_219, retro_pcap_292,
Pongo abelii ENSPPYG00000020125 ortholog_one2many 1 retrogene
retro_pabe_3431,
Pteropus vampyrus ENSPVAG00000009452 ortholog_one2many 1 retrogene
retro_pvam_1224,
Sorex araneus ENSSARG00000007710 ortholog_one2many 1 retrogene
retro_sara_18,
Ictidomys tridecemlineatus ENSSTOG00000006056 ortholog_one2many 1 retrogene
retro_itri_1668,
Tupaia belangeri ENSTBEG00000009917 ortholog_one2many 1 retrogene
retro_tbel_1245,
Tursiops truncatus ENSTTRG00000003226 ortholog_one2many 1 retrogene
retro_ttru_1494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_527 51.76 61.01
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Download FASTA sequences of all ENSFCAG00000026323 retrocopies