Parental gene:

UBA52, ENSCAFG00000014723

Aliases:UBA52, UB-RPL40, UBCEP2
Description:Canis lupus familiaris ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA. [Source:RefSeq mRNA;Acc:NM_001128095]
Organism:Dog (Canis familiaris)
Coordinates:20:44477127..44479948(-)


>ENSCAFG00000014723
ATGCAGATCTTTGTGAAGACCCTGACGGGCAAAACTATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAAAATGTCAA
AGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAGCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAAGATGGCC
GAACTCTGTCAGACTACAATATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGCCTGCGAGGTGGCATCATTGAGCCT
TCACTCCGCCAGCTGGCCCAGAAATACAACTGCGACAAGATGATCTGCCGCAAGTGTTATGCTCGCCTGCACCCCCGTGC
TGTCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACAACCTGCGCCCCAAAAAGAAGGTCAAATAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 264 .47 RPM
SRP017611_brain 49 .06 RPM
SRP017611_kidney 205 .84 RPM
SRP017611_liver 58 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Latimeria chalumnae ENSLACG00000008132 ortholog_one2many 1 retrogene
retro_lcha_11,
Microcebus murinus ENSMICG00000017583 ortholog_one2one 5 retrogenes
retro_mmur_143, retro_mmur_1486, retro_mmur_150, retro_mmur_633, retro_mmur_708,
Myotis lucifugus ENSMLUG00000029594 possible_ortholog 5 retrogenes
retro_mluc_1995, retro_mluc_2057, retro_mluc_2203, retro_mluc_44, retro_mluc_829,
Macaca mulatta ENSMMUG00000016085 possible_ortholog 7 retrogenes
retro_mmul_1184, retro_mmul_1580, retro_mmul_1625, retro_mmul_2183, retro_mmul_2311, retro_mmul_232, retro_mmul_896,
Monodelphis domestica ENSMODG00000003499 ortholog_one2one 1 retrogene
retro_mdom_867,
Mustela putorius furo ENSMPUG00000015527 ortholog_one2one 8 retrogenes
retro_mputfur_1059, retro_mputfur_1119, retro_mputfur_1126, retro_mputfur_382, retro_mputfur_516, retro_mputfur_713, retro_mputfur_78, retro_mputfur_945,
Mus musculus ENSMUSG00000090137 possible_ortholog 3 retrogenes
retro_mmus_101, retro_mmus_129, retro_mmus_31,
Otolemur garnettii ENSOGAG00000028000 ortholog_one2one 10 retrogenes
retro_ogar_1345, retro_ogar_1419, retro_ogar_1583, retro_ogar_1604, retro_ogar_1792, retro_ogar_2026, retro_ogar_2370, retro_ogar_2485, retro_ogar_2544, retro_ogar_3337,
Pongo abelii ENSPPYG00000009746 possible_ortholog 2 retrogenes
retro_pabe_111, retro_pabe_3291,
Sus scrofa ENSSSCG00000013907 ortholog_one2one 1 retrogene
retro_sscr_988,
Ictidomys tridecemlineatus ENSSTOG00000004678 ortholog_one2one 1 retrogene
retro_itri_49,
Tursiops truncatus ENSTTRG00000021461 ortholog_one2one 1 retrogene
retro_ttru_1582,
Xiphophorus maculatus ENSXMAG00000003911 ortholog_one2one 1 retrogene
retro_xmac_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_600 57.39 89.06
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_654 71.68 86.72
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cfam_873 63.49 96.09
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_cfam_1671 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_cfam_1725 61.36 67.97
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_cfam_1879 93.02 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_cfam_1933 66.36 82.03
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_cfam_2205 66.14 97.66
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000014723 retrocopies