Parental gene:

PSMA7, ENSCJAG00000014419

Aliases:None
Description:proteasome (prosome, macropain) subunit, alpha type, 7 [Source:HGNC Symbol;Acc:9536]
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:56157505..56162325(-)


>ENSCJAG00000014419
CTGGGTTTGTGCATCTTAAAGGTTGGTGTTCGAGGAAGAGACATTGTTGTTCTTGGTGTGGAGAAGAAGTCAGTGGCCAA
ACTGCAGGATGAAAGAACAGTACGGAAGATCTGCGCTTTGGATGACAATGTTTGCATGGCCTTTGCAGGCCTCACCGCCG
ATGCGAGGATAGTCATCAACAGGGCCCGGGTGGAGTGCCAGAGCCACCGGCTGACCGTGGAGGACCCGGTCACTGTGGAG
TACATCACCCGCTACATCGCCAGTCTGAAGCAGCGTTACACGCAAAGCAATGGGCGCAGGCCGTTTGGCATCTCTGCCCT
CATTGTGGGTTTCGACTTTGATGGCACTCCTAGACTCTATCAGACTGACCCCTCAGGCACATACCATGCTTGGAAGGCCA
ATGCTATAGGCCGAGGTGCCAAGTCGGTGCGTGAGTTCCTGGAGAAGAACTATACTGATGAAGCCATTGAAACAGACGAT
CTGACCATTAAGCTGGTGATCAAGGCACTCCTGGAAGTGGTTCAGTCAGGTGGCAAAAACATTGAACTTGCTGTCATGAG
GCGAGATCAACCCCTCAAGATTTTAAATCCTGAAGAAATTGAGAAATATGTTGCTGAAATTGAGAAAGAAAAAGAAGAAA
ACGAAAAGAAGAAACAAAAGAAAGCATCATGA

Library Parental gene expression (RPM)
SRP051959_spleen 23 .05 RPM
SRP051959_skeletal_muscle 28 .06 RPM
SRP051959_lymph_node 23 .22 RPM
SRP051959_lung 18 .04 RPM
SRP051959_liver 20 .71 RPM
SRP051959_kidney 25 .82 RPM
SRP051959_heart 15 .05 RPM
SRP051959_colon 24 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000003249 possible_ortholog 1 retrogene
retro_fcat_1621,
Mus musculus ENSMUSG00000027566 ortholog_one2one 1 retrogene
retro_mmus_407,
Rattus norvegicus ENSRNOG00000008630 ortholog_one2one 1 retrogene
retro_rnor_2693,
Ictidomys tridecemlineatus ENSSTOG00000012489 ortholog_one2one 1 retrogene
retro_itri_279,
Tupaia belangeri ENSTBEG00000012281 ortholog_one2one 2 retrogenes
retro_tbel_1048, retro_tbel_2392,
Drosophila melanogaster FBgn0004066 ortholog_many2many 1 retrogene
retro_dmel_63,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_426 60.16 54.26
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Download FASTA sequences of all ENSCJAG00000014419 retrocopies