Parental gene: | Psma7, ENSMUSG00000027566 |
| Aliases: | Psma7, C6-I |
| Description: | proteasome (prosome, macropain) subunit, alpha type 7 [Source:MGI Symbol;Acc:MGI:1347070] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:180036372..180042433(-) |
>ENSMUSG00000027566
ATGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAA
AAAGGGCTCCACCGCGGTTGGTGTTCGAGGAAAGGACATTGTTGTTCTTGGTGTGGAAAAAAAATCAGTGGCCAAGCTAC
AAGATGAAAGAACAGTACGAAAAATCTGCGCCTTGGACGATAACGTCTGTATGGCCTTTGCAGGTCTCACCGCTGATGCA
AGGATAGTCATCAACAGAGCCCGGGTAGAGTGCCAGAGCCACCGGCTGACAGTGGAGGACCCAGTGACTGTGGAGTACAT
CACCCGCTACATTGCGAGTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTG
TGGGTTTTGACTTTGATGGCACTCCCAGACTCTATCAGACTGACCCCTCGGGCACATACCATGCTTGGAAGGCCAATGCC
ATAGGCCGGGGCGCCAAGTCAGTGCGTGAATTTCTGGAGAAGAACTACACAGATGATGCCATTGAAACAGATGATCTGAC
CATCAAACTTGTGATCAAGGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGCCGTCATGAGGCGGG
ATCAGCCGCTCAAGATTCTAAATCCTGAAGAAATTGAGAAGTATGTTGCTGAAATTGAGAAGGAGAAAGAAGAAAATGAA
AAGAAGAAGCAAAAGAAAGCATCTTGA
ATGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAA
AAAGGGCTCCACCGCGGTTGGTGTTCGAGGAAAGGACATTGTTGTTCTTGGTGTGGAAAAAAAATCAGTGGCCAAGCTAC
AAGATGAAAGAACAGTACGAAAAATCTGCGCCTTGGACGATAACGTCTGTATGGCCTTTGCAGGTCTCACCGCTGATGCA
AGGATAGTCATCAACAGAGCCCGGGTAGAGTGCCAGAGCCACCGGCTGACAGTGGAGGACCCAGTGACTGTGGAGTACAT
CACCCGCTACATTGCGAGTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTG
TGGGTTTTGACTTTGATGGCACTCCCAGACTCTATCAGACTGACCCCTCGGGCACATACCATGCTTGGAAGGCCAATGCC
ATAGGCCGGGGCGCCAAGTCAGTGCGTGAATTTCTGGAGAAGAACTACACAGATGATGCCATTGAAACAGATGATCTGAC
CATCAAACTTGTGATCAAGGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGCCGTCATGAGGCGGG
ATCAGCCGCTCAAGATTCTAAATCCTGAAGAAATTGAGAAGTATGTTGCTGAAATTGAGAAGGAGAAAGAAGAAAATGAA
AAGAAGAAGCAAAAGAAAGCATCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 52 .43 RPM |
| SRP007412_cerebellum | 64 .31 RPM |
| SRP007412_heart | 62 .63 RPM |
| SRP007412_kidney | 77 .92 RPM |
| SRP007412_liver | 76 .55 RPM |
| SRP007412_testis | 18 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014419 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003249 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008630 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012489 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012281 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0004066 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_407 | 59.63 | 64.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000027566 retrocopies