Parental gene: | YWHAE, ENSDNOG00000003808 |
| Aliases: | None |
| Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1690:5001..35391(-) |
>ENSDNOG00000003808
AAAGGAGACTACCACAGGTATCTGGCTGAATTTGCCACGGGAAATGACAGGAAGGAGGCTGCAGAGAACAGCCTAGTGGC
TTATAAAGCTGCTAGTGATATTGCAATGACAGAACTTCCACCAACACATCCCATTCGCTTAGGTCTTGCTCTGAATTTTT
CTGTATTCTACTATGAAATTCTTAATTCCCCTGACCGCGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGATGCAATTGCA
GAACTGGATACCCTGAGTGAAGAAAGCTATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATG
GACTTCAGACATGCAGGGTGATGNNNNNNAGCAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAATCAGTGA
AAAGGAGACTACCACAGGTATCTGGCTGAATTTGCCACGGGAAATGACAGGAAGGAGGCTGCAGAGAACAGCCTAGTGGC
TTATAAAGCTGCTAGTGATATTGCAATGACAGAACTTCCACCAACACATCCCATTCGCTTAGGTCTTGCTCTGAATTTTT
CTGTATTCTACTATGAAATTCTTAATTCCCCTGACCGCGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGATGCAATTGCA
GAACTGGATACCCTGAGTGAAGAAAGCTATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATG
GACTTCAGACATGCAGGGTGATGNNNNNNAGCAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAATCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 84 .98 RPM |
| SRP012922_cerebellum | 119 .87 RPM |
| SRP012922_heart | 57 .08 RPM |
| SRP012922_kidney | 72 .28 RPM |
| SRP012922_liver | 35 .30 RPM |
| SRP012922_lung | 62 .01 RPM |
| SRP012922_quadricep_muscle | 81 .87 RPM |
| SRP012922_spleen | 49 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010861 | possible_ortholog | 2 retrogenes | |
| Ciona intestinalis | ENSCING00000023856 | ortholog_one2many | 1 retrogene | |
| Ciona savignyi | ENSCSAVG00000011723 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000001672 | other_paralog | 10 retrogenes | |
| Echinops telfairi | ENSETEG00000012056 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016840 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014607 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007769 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1452 | 90.41 | 55.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2602 | 87.67 | 55.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000003808 retrocopies