RetrogeneDB ID: | retro_chof_905 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_166410:1405..1807(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAE | ||
Ensembl ID: | ENSCHOG00000010861 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] |
Percent Identity: | 73.91 % |
Parental protein coverage: | 57.76 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | YKMKGDYHRYLAEFATGND-RKEAAENSLVAYKAASDIAMTEPPP-THPIRLGLALDFSVFYYEIP-NSP |
YKMKGD..RYL.EFATG.D...EAAE.SLVA.K.ASD.AMTE.PP.THPIRLG.A..FSV..YEI...S. | |
Retrocopy | YKMKGDCRRYLLEFATGHD>AEEAAEISLVAKKVASDSAMTELPP>THPIRLGHAVNFSVLHYEII<TSR |
Parental | DRACRLAKAAFDDAI-AELGTLSEESYKDSALIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ |
DR..R.AKAAFDDA...EL.TLSEES.KD...IMQLL.DNL.LW.SDMQGDGEEQNKEALQDVEDENQ | |
Retrocopy | DRTRRSAKAAFDDAV<SELDTLSEESSKDFTVIMQLLCDNLPLWNSDMQGDGEEQNKEALQDVEDENQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |