Parental gene:

YWHAE, ENSPPYG00000007769

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Orangutan (Pongo abelii)
Coordinates:17:1190119..1246700(-)


>ENSPPYG00000007769
ATGGATGATCGAGAGGATCTGGTGTACCAGGCGAAGCTGGCCGAGCAGGCTGAGCGATACGACGAAATGGTGGAGTCAAT
GAAGAAAGTAGCAGGGATGGATGTGGAGCTGACAGTTGAAGAAAGAAACCTTCTATCTGTTGCATATAAGAATGTGATTG
GAGCTAGAAGAGCCTCCTGGAGAATAATCAGCAGCATTGAACAGAAAGAAGAAAACAAGGGAGGAGAAGACAAGCTAAAA
ATGATTCGGGAATATCGGCAAATGGTTGAGACTGAGCTAAAGTTAATCTGTTGTGACATTCTGGATGTACTGGACAAACA
CCTCATTCCAGCAGCTAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGGGACTACCACAGGTATCTGGCAG
AATTTGCCACAGGAAACGACAGGAAGGAGGCTGCGGAGAACAGCCTAGTGGCTTATAAAGCTGCTAGTGATATTGCAATG
ACAGAACTTCCACCAACGCATCCTATTCGCTTAGGTCTTGCTCTCAATTTTTCCGTATTCTACTACGAAATTCTTAATTC
CCCTGACCGTGCCTGCAGGTTGGCAAAAGCAGCTTTCGATGATGCAATTGCAGAACTGGATACGCTGAGTGAAGAAAGCT
ATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATGGACTTCAGACATGCAGGGTGACGGTGAA
GAGCAGAATAAAGAAGCGCTGCAGGACGTGGAAGACGAAAATCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 551 .30 RPM
SRP007412_cerebellum 371 .37 RPM
SRP007412_heart 183 .09 RPM
SRP007412_kidney 279 .79 RPM
SRP007412_liver 168 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005664 ortholog_one2one 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Choloepus hoffmanni ENSCHOG00000010861 ortholog_one2one 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_many2many 1 retrogene
retro_cint_15,
Cavia porcellus ENSCPOG00000008007 possible_ortholog 1 retrogene
retro_cpor_307,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2many 2 retrogenes
retro_csav_13, retro_csav_9,
Dasypus novemcinctus ENSDNOG00000003808 possible_ortholog 2 retrogenes
retro_dnov_1452, retro_dnov_2602,
Echinops telfairi ENSETEG00000012056 ortholog_one2one 2 retrogenes
retro_etel_1762, retro_etel_738,
Felis catus ENSFCAG00000011368 possible_ortholog 1 retrogene
retro_fcat_1636,
Homo sapiens ENSG00000108953 ortholog_one2one 4 retrogenes
retro_hsap_2324, retro_hsap_3739, retro_hsap_3851, retro_hsap_4703,
Gorilla gorilla ENSGGOG00000016840 ortholog_one2one 1 retrogene
retro_ggor_2596,
Monodelphis domestica ENSMODG00000010174 ortholog_one2one 2 retrogenes
retro_mdom_1567, retro_mdom_744,
Nomascus leucogenys ENSNLEG00000000656 ortholog_one2one 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Otolemur garnettii ENSOGAG00000006155 ortholog_one2one 2 retrogenes
retro_ogar_1003, retro_ogar_2144,
Pongo abelii ENSPPYG00000011041 other_paralog 5 retrogenes
retro_pabe_3453, retro_pabe_3454, retro_pabe_3519, retro_pabe_3520, retro_pabe_692,
Pongo abelii ENSPPYG00000012663 other_paralog 4 retrogenes
retro_pabe_1165, retro_pabe_2490, retro_pabe_3391, retro_pabe_3511,
Pongo abelii ENSPPYG00000018791 other_paralog 7 retrogenes
retro_pabe_103, retro_pabe_1242, retro_pabe_2047, retro_pabe_3417, retro_pabe_3740, retro_pabe_556, retro_pabe_89,
Pan troglodytes ENSPTRG00000008521 ortholog_one2one 5 retrogenes
retro_ptro_1697, retro_ptro_2538, retro_ptro_2624, retro_ptro_2626, retro_ptro_2993,
Ictidomys tridecemlineatus ENSSTOG00000005084 ortholog_one2one 1 retrogene
retro_itri_1175,
Vicugna pacos ENSVPAG00000010288 ortholog_one2one 3 retrogenes
retro_vpac_230, retro_vpac_411, retro_vpac_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1644 78.14 96.08
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_1646 80.09 90.20
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_pabe_2107 93.08 53.75
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_pabe_3219 75.51 75.69
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000007769 retrocopies