Parental gene:

YWHAE, ENSGGOG00000016840

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:17:1267091..1324051(-)


>ENSGGOG00000016840
ATGGATGATCGAGAGGATCTGGTGTACCAGGCGAAGCTGGCCGAGCAGGCTGAGCGATACGACGAAATGGTGGAGTCAAT
GAAGAAAGTAGCAGGGATGGATGTGGAGCTGACAGTTGAAGAAAGAAACCTCCTATCTGTTGCATATAAGAATGTGATTG
GAGCTAGAAGAGCCTCCTGGAGAATAATCAGCAGCATTGAACAGAAAGAAGAAAACAAGGGAGGAGAAGACAAGCTAAAA
ATGATTCGGGAATATCGGCAAATGGTTGAGACTGAGCTAAAGTTAATCTGTTGTGACATTCTGGATGTACTGGACAAACA
CCTCATTCCAGCAGCTAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGGGACTACCACAGGTATCTGGCAG
AATTTGCCACAGGAAACGACAGGAAGGAGGCTGCGGAGAACAGCCTAGTGGCTTATAAAGCTGCTAGTGATATTGCAATG
ACAGAACTTCCACCAACGCATCCTATTCGCTTAGGTCTTGCTCTCAATTTTTCCGTATTCTACTACGAAATTCTTAATTC
CCCTGACCGTGCCTGCAGGTTGGCAAAAGCAGCTTTCGATGATGCCATTGCAGAACTGGATACGCTGAGTGAAGAAAGCT
ATAAGGACTCCACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATGGACTTCAGACATGCAGGGTGACGGTGAA
GAGCAGAATAAAGAAGCGCTGCAGGACGTGGAAGACGAAAATCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 485 .82 RPM
SRP007412_cerebellum 311 .56 RPM
SRP007412_heart 81 .05 RPM
SRP007412_kidney 261 .16 RPM
SRP007412_liver 88 .29 RPM
SRP007412_testis 444 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005664 ortholog_one2one 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Choloepus hoffmanni ENSCHOG00000010861 ortholog_one2one 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_many2many 1 retrogene
retro_cint_15,
Cavia porcellus ENSCPOG00000008007 possible_ortholog 1 retrogene
retro_cpor_307,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2many 2 retrogenes
retro_csav_13, retro_csav_9,
Dasypus novemcinctus ENSDNOG00000003808 possible_ortholog 2 retrogenes
retro_dnov_1452, retro_dnov_2602,
Echinops telfairi ENSETEG00000012056 ortholog_one2one 2 retrogenes
retro_etel_1762, retro_etel_738,
Felis catus ENSFCAG00000011368 possible_ortholog 1 retrogene
retro_fcat_1636,
Homo sapiens ENSG00000108953 ortholog_one2one 4 retrogenes
retro_hsap_2324, retro_hsap_3739, retro_hsap_3851, retro_hsap_4703,
Gorilla gorilla ENSGGOG00000001569 other_paralog 1 retrogene
retro_ggor_2081,
Gorilla gorilla ENSGGOG00000004580 other_paralog 2 retrogenes
retro_ggor_2795, retro_ggor_699,
Gorilla gorilla ENSGGOG00000022133 other_paralog 9 retrogenes
retro_ggor_1092, retro_ggor_1754, retro_ggor_211, retro_ggor_2379, retro_ggor_2997, retro_ggor_2998, retro_ggor_3020, retro_ggor_499, retro_ggor_544,
Monodelphis domestica ENSMODG00000010174 ortholog_one2one 2 retrogenes
retro_mdom_1567, retro_mdom_744,
Nomascus leucogenys ENSNLEG00000000656 ortholog_one2one 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Otolemur garnettii ENSOGAG00000006155 ortholog_one2one 2 retrogenes
retro_ogar_1003, retro_ogar_2144,
Pongo abelii ENSPPYG00000007769 ortholog_one2one 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,
Pan troglodytes ENSPTRG00000008521 ortholog_one2one 5 retrogenes
retro_ptro_1697, retro_ptro_2538, retro_ptro_2624, retro_ptro_2626, retro_ptro_2993,
Ictidomys tridecemlineatus ENSSTOG00000005084 ortholog_one2one 1 retrogene
retro_itri_1175,
Vicugna pacos ENSVPAG00000010288 ortholog_one2one 3 retrogenes
retro_vpac_230, retro_vpac_411, retro_vpac_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2596 85.54 64.71
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Download FASTA sequences of all ENSGGOG00000016840 retrocopies