RetrogeneDB - Parental gene ENSDNOG00000012825 details

							
>ENSDNOG00000012825
ATGGCTGCCATTCGGAAGAAGCTGGTGATTGTTGGTGATGGAGCCTGTGGCAAGACCTGCTTGCTCATAGTCTTCAGCAA

GGACCAGTTCCCAGAGGTATATGTGCCCACGGTGTTTGAAAACTATGTGGCTGATATTGAAGTGGATGGAAAGCAGGTAG

AGTTGGCTTTGTGGGACACTGCTGGGCAGGAAGATTATGATCGTCTGAGACCCCTCTCCTACCCAGACACTGATGTTATA

CTGATGTGTTTCTCCATCGACAGCCCTGATAGTTTAGAAAACATACCAGAAAAATGGACCCCGGAAGTCAAGCATTTCTG

TCCCAATGTGCCCATCATCCTGGTTGGGAACAAGAAAGATCTTCGGAACGATGAGCACACAAGGCGGGAGTTAGCCAAGA

TGAAGCAGGAACCTGTAAAACCTGAAGAAGGCAGAGATATGGCAAACAGGATTGGTGCTTTTGGGTATATGGAGTGTTCA

GCAAAGACCAAAGATGGAGTGAGGGAGGTTTTTGAAATGGCCACAAGAGCAGCTCTGCAAGCCAGACGTGGGAAGAAAAA

ATCTGGGTGCCTTGTTTTGTGA

Library	Parental gene expression (RPM)
SRP012922_ascending_colon	145 .85 RPM
SRP012922_cerebellum	46 .46 RPM
SRP012922_heart	27 .15 RPM
SRP012922_kidney	92 .00 RPM
SRP012922_liver	45 .98 RPM
SRP012922_lung	108 .89 RPM
SRP012922_quadricep_muscle	39 .98 RPM
SRP012922_spleen	124 .42 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000008297	ortholog_one2one	1 retrogene	retro_acar_41,
Ailuropoda melanoleuca	ENSAMEG00000012584	ortholog_one2one	3 retrogenes	retro_amel_101, retro_amel_1515, retro_amel_615,
Anas platyrhynchos	ENSAPLG00000014687	ortholog_one2one	1 retrogene	retro_apla_10,
Bos taurus	ENSBTAG00000004279	ortholog_one2one	2 retrogenes	retro_btau_206, retro_btau_540,
Canis familiaris	ENSCAFG00000023066	ortholog_one2many	2 retrogenes	retro_cfam_1652, retro_cfam_186,
Callithrix jacchus	ENSCJAG00000003904	ortholog_one2one	3 retrogenes	retro_cjac_1306, retro_cjac_2010, retro_cjac_411,
Dasypus novemcinctus	ENSDNOG00000004736	other_paralog	1 retrogene	retro_dnov_2308,
Dipodomys ordii	ENSDORG00000003382	ortholog_one2one	3 retrogenes	retro_dord_1, retro_dord_18, retro_dord_538,
Felis catus	ENSFCAG00000027456	ortholog_one2one	1 retrogene	retro_fcat_29,
Gasterosteus aculeatus	ENSGACG00000005670	possible_ortholog	1 retrogene	retro_gacu_9,
Gallus gallus	ENSGALG00000003806	ortholog_one2one	1 retrogene	retro_ggal_5,
Gorilla gorilla	ENSGGOG00000012843	ortholog_one2one	1 retrogene	retro_ggor_2450,
Gadus morhua	ENSGMOG00000008188	possible_ortholog	1 retrogene	retro_gmor_18,
Latimeria chalumnae	ENSLACG00000016941	ortholog_one2one	1 retrogene	retro_lcha_15,
Loxodonta africana	ENSLAFG00000009726	ortholog_one2one	8 retrogenes	retro_lafr_1196, retro_lafr_1197, retro_lafr_1198, retro_lafr_178, retro_lafr_203, retro_lafr_261, retro_lafr_392, retro_lafr_82,
Meleagris gallopavo	ENSMGAG00000002280	ortholog_one2one	1 retrogene	retro_mgal_2,
Myotis lucifugus	ENSMLUG00000013911	ortholog_one2one	6 retrogenes	retro_mluc_108, retro_mluc_193, retro_mluc_1976, retro_mluc_2553, retro_mluc_2554, retro_mluc_2555,
Macaca mulatta	ENSMMUG00000012962	possible_ortholog	1 retrogene	retro_mmul_977,
Monodelphis domestica	ENSMODG00000012981	possible_ortholog	2 retrogenes	retro_mdom_19, retro_mdom_294,
Mus musculus	ENSMUSG00000007815	ortholog_one2one	9 retrogenes	retro_mmus_178, retro_mmus_191, retro_mmus_2041, retro_mmus_2507, retro_mmus_3728, retro_mmus_3729, retro_mmus_3964, retro_mmus_3965, retro_mmus_3966,
Nomascus leucogenys	ENSNLEG00000006839	ortholog_one2one	4 retrogenes	retro_nleu_104, retro_nleu_2207, retro_nleu_377, retro_nleu_814,
Ornithorhynchus anatinus	ENSOANG00000013807	ortholog_one2one	1 retrogene	retro_oana_7,
Oryctolagus cuniculus	ENSOCUG00000013323	ortholog_one2one	3 retrogenes	retro_ocun_1075, retro_ocun_726, retro_ocun_854,
Otolemur garnettii	ENSOGAG00000028489	ortholog_one2one	1 retrogene	retro_ogar_2340,
Oreochromis niloticus	ENSONIG00000018884	possible_ortholog	1 retrogene	retro_onil_32,
Procavia capensis	ENSPCAG00000009699	ortholog_one2one	3 retrogenes	retro_pcap_191, retro_pcap_202, retro_pcap_98,
Pelodiscus sinensis	ENSPSIG00000015328	ortholog_one2one	1 retrogene	retro_psin_7,
Pan troglodytes	ENSPTRG00000014922	ortholog_one2one	3 retrogenes	retro_ptro_10, retro_ptro_2456, retro_ptro_625,
Pteropus vampyrus	ENSPVAG00000008738	ortholog_one2one	1 retrogene	retro_pvam_599,
Rattus norvegicus	ENSRNOG00000050519	ortholog_one2one	3 retrogenes	retro_rnor_127, retro_rnor_2899, retro_rnor_408,
Sarcophilus harrisii	ENSSHAG00000016308	ortholog_one2one	2 retrogenes	retro_shar_60, retro_shar_96,
Sus scrofa	ENSSSCG00000022080	ortholog_one2one	1 retrogene	retro_sscr_72,
Ictidomys tridecemlineatus	ENSSTOG00000004561	possible_ortholog	2 retrogenes	retro_itri_39, retro_itri_96,
Takifugu rubripes	ENSTRUG00000011944	possible_ortholog	1 retrogene	retro_trub_19,
Tarsius syrichta	ENSTSYG00000008220	possible_ortholog	3 retrogenes	retro_tsyr_1604, retro_tsyr_413, retro_tsyr_593,
Vicugna pacos	ENSVPAG00000010931	ortholog_one2one	3 retrogenes	retro_vpac_130, retro_vpac_24, retro_vpac_492,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_dnov_29	53.48	96.89	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_dnov_326	69.04	99.48	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_dnov_1012	50.41	60.10	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_dnov_1814	98.96	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_dnov_1904	77.44	68.91	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_dnov_2090	56.00	89.64	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSDNOG00000012825 retrocopies

Parental gene:	RHOA, ENSDNOG00000012825
Aliases:	None
Description:	ras homolog family member A [Source:HGNC Symbol;Acc:667]
Organism:	*Armadillo (Dasypus novemcinctus)*
Coordinates:	GeneScaffold_6707:70285..88889(-)

Parental gene:

RHOA, ENSDNOG00000012825