Parental gene: | RPS7, ENSDNOG00000013285 |
| Aliases: | None |
| Description: | ribosomal protein S7 [Source:HGNC Symbol;Acc:10440] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5769:3295..10763(+) |
>ENSDNOG00000013285
GCCCTTCTTGAGCTGGAGATGAACTCAGACCTAAAGGCTCAGTTACGGGAGCTGAATATAACAGCAGCCAAGGAAATTGA
AGTTGGTGGTGGTCGGAAGGCTATTATAATCTTTGTTCCCGTACCTCAACTGAAGTCTTTCCAGAAAATCCAAGTCCGGC
TAGTACGCGAATTGGAGAAAAAGTTCAGTGGAAAGCATGTTGTCTTTATTGCTCAGAGGAGAATTCTGCCTAAACCAACT
CGAAAAAGTCGTACAAAAAATAAGCAAAAGCGTCCCAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGAAACATTTTCTGGTGTGTATAAGAAGCTCACTGGCAAGGATGTT
AACTTTGAATTTCCAGAGTTTCAATTGTAA
GCCCTTCTTGAGCTGGAGATGAACTCAGACCTAAAGGCTCAGTTACGGGAGCTGAATATAACAGCAGCCAAGGAAATTGA
AGTTGGTGGTGGTCGGAAGGCTATTATAATCTTTGTTCCCGTACCTCAACTGAAGTCTTTCCAGAAAATCCAAGTCCGGC
TAGTACGCGAATTGGAGAAAAAGTTCAGTGGAAAGCATGTTGTCTTTATTGCTCAGAGGAGAATTCTGCCTAAACCAACT
CGAAAAAGTCGTACAAAAAATAAGCAAAAGCGTCCCAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGAAACATTTTCTGGTGTGTATAAGAAGCTCACTGGCAAGGATGTT
AACTTTGAATTTCCAGAGTTTCAATTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 133 .60 RPM |
| SRP012922_cerebellum | 58 .70 RPM |
| SRP012922_heart | 106 .04 RPM |
| SRP012922_kidney | 137 .45 RPM |
| SRP012922_liver | 71 .99 RPM |
| SRP012922_lung | 156 .85 RPM |
| SRP012922_quadricep_muscle | 136 .74 RPM |
| SRP012922_spleen | 224 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016462 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000020253 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000023243 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023095 | possible_ortholog | 13 retrogenes | |
| Loxodonta africana | ENSLAFG00000015087 | possible_ortholog | 11 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006121 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011870 | possible_ortholog | 7 retrogenes | |
| Mus musculus | ENSMUSG00000061477 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015407 | ortholog_one2one | 10 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008507 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028165 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025872 | possible_ortholog | 12 retrogenes | |
| Pan troglodytes | ENSPTRG00000011615 | possible_ortholog | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002071 | possible_ortholog | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008551 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000027353 | possible_ortholog | 5 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000024830 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001616 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_238 | 71.74 | 53.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_558 | 77.89 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_582 | 73.12 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_623 | 79.35 | 54.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_791 | 80.90 | 52.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_1091 | 68.42 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_1351 | 73.12 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_1388 | 77.17 | 54.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_1459 | 77.66 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_1688 | 73.40 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_1849 | 90.32 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_1940 | 82.98 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_1970 | 93.55 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_2409 | 89.25 | 55.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013285 retrocopies