Parental gene:

CDV3, ENSECAG00000015689

Aliases:None
Description:CDV3 homolog (mouse) [Source:HGNC Symbol;Acc:26928]
Organism:Horse (Equus caballus)
Coordinates:16:69192656..69197645(+)


>ENSECAG00000015689
GGAGGTGGTGTAGAGAAATCTTCAGGTCCCTGGAATAAAACAGCTCCGGTGCAAGCACCTCCTGCTCCAGGAATTGTTAC
AGAAACCCCCGAACCGGCAATGACTAGTGGTGTGTATAGGCCTCCCGGAGCCCGGTTAACCACAACAAGGAAAACCCCAC
AAGGACCGCCAGAGATATACAGCGACACGCAGTTCCCATCCCTGCAGTCCACTGCCAAGCACGTAGAGAGCCGGAAGGAT
AAAGGGATGCAGAAGAGCTTTGAAGTAGTCAGACACAGAACTAGACGTAGGGATGAGGTTTCAGGAAGCCAGGCCCCTAC
ACTGCAGCTAGACAACCGGTGTGCTGTGCTGGGAGGTCAGAGGAGCAGCTGTGCACAGTCCAGTTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 11 .45 RPM
SRP021940_cerebellum 12 .72 RPM
SRP021940_embryo 24 .55 RPM
SRP021940_placental_villous 15 .64 RPM
SRP021940_synovial_membrane 17 .73 RPM
SRP021940_testis 73 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000035556 ortholog_one2many 1 retrogene
retro_btau_253,
Choloepus hoffmanni ENSCHOG00000008963 ortholog_one2one 5 retrogenes
retro_chof_1355, retro_chof_1701, retro_chof_1763, retro_chof_2308, retro_chof_818,
Callithrix jacchus ENSCJAG00000002998 ortholog_one2one 1 retrogene
retro_cjac_2928,
Dasypus novemcinctus ENSDNOG00000010208 ortholog_one2one 5 retrogenes
retro_dnov_2359, retro_dnov_2616, retro_dnov_460, retro_dnov_496, retro_dnov_656,
Homo sapiens ENSG00000091527 ortholog_one2one 1 retrogene
retro_hsap_2678,
Gorilla gorilla ENSGGOG00000027821 ortholog_one2one 1 retrogene
retro_ggor_1869,
Mus musculus ENSMUSG00000032803 ortholog_one2one 10 retrogenes
retro_mmus_1266, retro_mmus_2405, retro_mmus_2408, retro_mmus_2411, retro_mmus_2412, retro_mmus_2416, retro_mmus_2418, retro_mmus_2422, retro_mmus_2423, retro_mmus_2534,
Nomascus leucogenys ENSNLEG00000003470 ortholog_one2one 1 retrogene
retro_nleu_1181,
Oryctolagus cuniculus ENSOCUG00000012748 ortholog_one2one 1 retrogene
retro_ocun_1106,
Ochotona princeps ENSOPRG00000003600 ortholog_one2one 3 retrogenes
retro_opri_1017, retro_opri_739, retro_opri_740,
Pongo abelii ENSPPYG00000025898 ortholog_one2one 1 retrogene
retro_pabe_2301,
Pan troglodytes ENSPTRG00000015409 ortholog_one2one 1 retrogene
retro_ptro_1805,
Sus scrofa ENSSSCG00000011637 ortholog_one2one 1 retrogene
retro_sscr_701,
Tupaia belangeri ENSTBEG00000014910 possible_ortholog 5 retrogenes
retro_tbel_2284, retro_tbel_2443, retro_tbel_4022, retro_tbel_4157, retro_tbel_4378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_444 79.84 100.00
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2. retro_ecab_636 75.00 99.22
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Download FASTA sequences of all ENSECAG00000015689 retrocopies