Parental gene: | CDV3, ENSOPRG00000003600 |
| Aliases: | None |
| Description: | CDV3 homolog (mouse) [Source:HGNC Symbol;Acc:26928] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_648:5532..16007(+) |
>ENSOPRG00000003600
AGAGGTACGGAGGAGCGGACCCTCGATGAGCTTCTCCGCAGGAGGAACAAGAAGATTAATACTGGGCCTACCAGCCGGGC
GGCCGGGCCCCAGGACTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAGTGAAAAGAGAGATGATGAGAAGAGGGAAGATCCAGGTGACTGGGAAGAAGCCGGTGGCGGT
GGTGGCATAGAAAAATCTTCAGGTCCCTGGAACAAAACAGCTCCAGTCCAAGCAGCTCCTGCTCCAGTAGTTGTTACAGA
AACTCCAGAGCCAGCGATGTCTAGTGGTGTGTATAGGCCACCTGGAGCCAGGCTAACCACAACCAGGAAAACGCCACAGG
GACCACCTGAGATCTACAGTGACACACAGTTCCCGTCCCTGCAGTCCACTGCCAAGCATGTAGAGAGCCGGAAGGATAAA
GAAATGGAGAAGAGCTATGAAGTAGTAAGGCACAAAAATAGAGGTAGAGATGAGGTTTCCAAAAACCAGGCCCTTAAACT
CCAGCTAGACAACCAGTATGCCGTGCTAGAGAATCAGAAAAGCAGCCGCATGCAGTGCGATTGA
AGAGGTACGGAGGAGCGGACCCTCGATGAGCTTCTCCGCAGGAGGAACAAGAAGATTAATACTGGGCCTACCAGCCGGGC
GGCCGGGCCCCAGGACTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAGTGAAAAGAGAGATGATGAGAAGAGGGAAGATCCAGGTGACTGGGAAGAAGCCGGTGGCGGT
GGTGGCATAGAAAAATCTTCAGGTCCCTGGAACAAAACAGCTCCAGTCCAAGCAGCTCCTGCTCCAGTAGTTGTTACAGA
AACTCCAGAGCCAGCGATGTCTAGTGGTGTGTATAGGCCACCTGGAGCCAGGCTAACCACAACCAGGAAAACGCCACAGG
GACCACCTGAGATCTACAGTGACACACAGTTCCCGTCCCTGCAGTCCACTGCCAAGCATGTAGAGAGCCGGAAGGATAAA
GAAATGGAGAAGAGCTATGAAGTAGTAAGGCACAAAAATAGAGGTAGAGATGAGGTTTCCAAAAACCAGGCCCTTAAACT
CCAGCTAGACAACCAGTATGCCGTGCTAGAGAATCAGAAAAGCAGCCGCATGCAGTGCGATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000035556 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008963 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002998 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010208 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000015689 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000091527 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027821 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009864 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000032803 | ortholog_one2one | 10 retrogenes | |
| Pongo abelii | ENSPPYG00000025898 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015409 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011637 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014910 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_739 | 80.29 | 63.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_740 | 87.50 | 63.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_1017 | 87.22 | 62.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000003600 retrocopies