Parental gene:

IDH3G, ENSECAG00000018509

Aliases:None
Description:isocitrate dehydrogenase 3 (NAD+) gamma [Source:HGNC Symbol;Acc:5386]
Organism:Horse (Equus caballus)
Coordinates:X:122231127..122239451(-)


>ENSECAG00000018509
ATGGCGCTGAAGGTGGCGACTGCTGCTGGCGGTGCTGCTAAGGCAGTACTCAGGCCGACCCTCCTCTGCCGTCCTTGGGA
GGTTCTAGGTGCCCCCAGGGCCCCCCGGAGGAGCTTCTCACAACGTACAATTCCACCGTCAGCTAAGTATGGTGGGCGGC
ACACGGTGACCATGATCCCAGGGGACGGCATTGGGCCAGAGCTCATGTTGCACGTCAAGTCTGTATTCAGGCACGCGTGT
GTGCCAGTGGACTTTGAGGAGGTGCACGTGAGCTCCAGCGCTGATGAAGAGGACATCCGAAATGCCATCATGGCCATCCG
TCGGAACCGTGTGGCCCTGAAGGGCAATATTGAAACAAACCATAACCTGCCACCGTCCCACAAGTCCCGAAACAACATCC
TCCGCACCAGTCTGGATCTCTATGCCAACGTCATCCACTGTAAGAGCTTGCCAGGAGTGGTGACCCGGCACAGAGACATA
GACATCCTTATCGTCCGTGAAAACACGGAGGGCGAGTACAGCAGCCTCGAGCACGAGAGCGTGGCAGGCGTGGTGGAGAG
CCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCTGAATACGCCTTCAAATTGGCCCAGGAGTGTGGGCGCAAGA
AAGTGACAGCCGTGCACAAGGCCAACATCATGAAACTGGGCGACGGGCTCTTCCTCCAGTGTTGCAAGGAGGTGGCAGCC
GGCTACCCCCAGATCACCTTTGAGAATATGATCGTGGACAACACCACTATGCAGCTGGTGTCCCGGCCCCAGCAGTTCGA
TGTCATGGTGATGCCCAATCTCTACGGCAACATTGTCAACAATGTCTGTGCAGGGCTGGTCGGGGGCCCTGGCCTTGTGG
CTGGGGCGAACTATGGCCACGTGTATGCCGTGTTTGAGACGGCTACGAGGAACACAGGCAAGAGCATCGCCAATAAGAAT
GTCGCCAACCCCACGGCCACACTGCTGGCAAGCTGCATGATGCTCGACCACCTCAAGCTCCACTCCTATGCCACCTCCAT
CCGCAAGGCCGTCTTGGCATCCATGGACAATGAAAACATGCACACCCCAGACATCGGGGGCCAGGGCACGACGTCGGAAG
CCATCCAGGACATCATCCGCCACATCCGCATTATCAACGGCCGGGCTGTGGAGGCGTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 33 .71 RPM
SRP021940_cerebellum 102 .05 RPM
SRP021940_embryo 67 .26 RPM
SRP021940_placental_villous 25 .16 RPM
SRP021940_synovial_membrane 40 .16 RPM
SRP021940_testis 28 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018466 ortholog_one2one 1 retrogene
retro_amel_1892,
Bos taurus ENSBTAG00000001059 ortholog_one2one 1 retrogene
retro_btau_1194,
Canis familiaris ENSCAFG00000019286 ortholog_one2one 1 retrogene
retro_cfam_1023,
Callithrix jacchus ENSCJAG00000011185 ortholog_one2one 1 retrogene
retro_cjac_1597,
Homo sapiens ENSG00000067829 ortholog_one2one 1 retrogene
retro_hsap_759,
Latimeria chalumnae ENSLACG00000007365 ortholog_one2one 1 retrogene
retro_lcha_17,
Loxodonta africana ENSLAFG00000006904 ortholog_one2one 1 retrogene
retro_lafr_560,
Macropus eugenii ENSMEUG00000013934 ortholog_one2one 1 retrogene
retro_meug_203,
Myotis lucifugus ENSMLUG00000004457 ortholog_one2many 1 retrogene
retro_mluc_396,
Mustela putorius furo ENSMPUG00000008781 ortholog_one2one 1 retrogene
retro_mputfur_644,
Mus musculus ENSMUSG00000002010 ortholog_one2one 1 retrogene
retro_mmus_134,
Nomascus leucogenys ENSNLEG00000013540 ortholog_one2one 1 retrogene
retro_nleu_394,
Otolemur garnettii ENSOGAG00000006735 ortholog_one2one 1 retrogene
retro_ogar_25,
Pteropus vampyrus ENSPVAG00000013163 ortholog_one2one 1 retrogene
retro_pvam_373,
Rattus norvegicus ENSRNOG00000037284 ortholog_one2one 1 retrogene
retro_rnor_209,
Sus scrofa ENSSSCG00000012783 ortholog_one2one 1 retrogene
retro_sscr_662,
Tursiops truncatus ENSTTRG00000011728 ortholog_one2one 1 retrogene
retro_ttru_848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_941 76.74 98.47
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Download FASTA sequences of all ENSECAG00000018509 retrocopies