Parental gene:

IDH3G, ENSSSCG00000012783

Aliases:None
Description:isocitrate dehydrogenase 3 (NAD+) gamma [Source:HGNC Symbol;Acc:5386]
Organism:Pig (Sus scrofa)
Coordinates:X:142093231..142102045(-)


>ENSSSCG00000012783
ATGGCGCTGAAGGTGGCGACGGCTGCAGGCGGCGCGGCGAAGGCAGTGCTCAGGCCAGCCCTCCTCTGCCGTCCCTGGGA
GGTTCTAGGTGCCCACGAGGCCCCCCGGAGGAGCTTCTCTCAACAGACAATTCCTCCGTCGGCCAAGTATGGGGGGCGGC
ACACGGTGACCATGATCCCGGGGGATGGCATCGGGCCGGAGCTCATGCTGCATGTCAAGTCTGTGTTCAGGCATGCGTGT
GTGCCTGTGGACTTCGAAGAGGTGCATGTGAGCTCCAACGCCGACGAGGAGGACATCCGGAATGCCATCATGGCCATCCG
TCGGAACCGTGTGGCTCTAAAGGGCAATATTGAAACAAACCACAACCTGCCGCCGTCGCACAAGTCCCGGAACAACATCC
TCCGCACCAGCCTGGACCTCTATGCCAACGTCATCCACTGCAAGAGCCTGCCCGGCGTCGTCACGCGGCACAGGGACGTC
GACATCCTCATCGTCCGGGAGAACACGGAGGGCGAGTACAGCAGCCTGGAGCACGAGAGCGTGGCAGGAGTGGTGGAGAG
CCTCAAGATCATCACCAAGGCCAAGTCCCTGCGCATCGCCGAGTACGCCTTCAAACTGGCCCAGGAGACGGGGCGCAAGA
AAGTGACGGCTGTGCACAAGGCCAACATCATGAAGCTGGGCGATGGGCTCTTCCTCCAGTGCTGCAAGGAGGTGGCGGCC
GGTTACCCCCACATCACCTTCGAGAACATGATCGTAGACAACACCACCATGCAGCTGGTGTCCCGGCCGCAGCAGTTCGA
CGTCATGGTGATGCCCAACCTCTACGGCAACATCGTCAACAACGTCTGCGCGGGCCTGGTGGGCGGCCCCGGGCTCGTGG
CGGGGGCCAACTACGGGCACGTGTACGCCGTCTTCGAGACCGCTACGAGGAACACAGGCAAGAGCATCGCCAACAAGAAC
ATTGCCAACCCCACAGCGACGCTGCTCGCAAGCTGCATGATGCTCGACCACCTCAAGCTCCACTCCTACGCCACGTCCAT
CCGCAAGGCCGTCTTGGCGTCCATGGACAACGAAAACATGCACACGCCAGACATCGGGGGCCAGGGCACGACGTCGGAAG
CCATCCAGGACATCATTCGCCACATCCGCATCATCAACGGGCGGGCGGTGGAGGCCTAG

Library Parental gene expression (RPM)
SRP014902_placenta 95 .96 RPM
SRP014902_testis 85 .15 RPM
SRP018288_heart 63 .94 RPM
SRP018288_kidney 77 .72 RPM
SRP018288_liver 52 .29 RPM
SRP018288_lung 57 .53 RPM
SRP018856_adipose 130 .65 RPM
SRP035408_brain 74 .83 RPM
SRP035408_liver 64 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018466 ortholog_one2one 1 retrogene
retro_amel_1892,
Bos taurus ENSBTAG00000001059 ortholog_one2one 1 retrogene
retro_btau_1194,
Canis familiaris ENSCAFG00000019286 ortholog_one2one 1 retrogene
retro_cfam_1023,
Callithrix jacchus ENSCJAG00000011185 ortholog_one2one 1 retrogene
retro_cjac_1597,
Equus caballus ENSECAG00000018509 ortholog_one2one 1 retrogene
retro_ecab_941,
Homo sapiens ENSG00000067829 ortholog_one2one 1 retrogene
retro_hsap_759,
Latimeria chalumnae ENSLACG00000007365 ortholog_one2one 1 retrogene
retro_lcha_17,
Loxodonta africana ENSLAFG00000006904 ortholog_one2one 1 retrogene
retro_lafr_560,
Macropus eugenii ENSMEUG00000013934 ortholog_one2one 1 retrogene
retro_meug_203,
Myotis lucifugus ENSMLUG00000004457 ortholog_one2many 1 retrogene
retro_mluc_396,
Mustela putorius furo ENSMPUG00000008781 ortholog_one2one 1 retrogene
retro_mputfur_644,
Mus musculus ENSMUSG00000002010 ortholog_one2one 1 retrogene
retro_mmus_134,
Nomascus leucogenys ENSNLEG00000013540 ortholog_one2one 1 retrogene
retro_nleu_394,
Otolemur garnettii ENSOGAG00000006735 ortholog_one2one 1 retrogene
retro_ogar_25,
Pteropus vampyrus ENSPVAG00000013163 ortholog_one2one 1 retrogene
retro_pvam_373,
Rattus norvegicus ENSRNOG00000037284 ortholog_one2one 1 retrogene
retro_rnor_209,
Tursiops truncatus ENSTTRG00000011728 ortholog_one2one 1 retrogene
retro_ttru_848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_662 54.00 50.26
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Download FASTA sequences of all ENSSSCG00000012783 retrocopies