Parental gene: | RPS25, ENSEEUG00000014630 |
| Aliases: | None |
| Description: | ribosomal protein S25 [Source:HGNC Symbol;Acc:10413] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_7995:6343..9209(-) |
>ENSEEUG00000014630
ATGCCACCCAAGGACGACAAGAAGAAAAAAGATGCCGGAAAATCGGCCAAGAAAGACAAAGATCCGGTGAACAAGTCTGG
GGGAAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGCTTAATAACCTCGTCTTGTTTGACAAAGCCA
CGTATGACAAGCTTTGTAAAGAAGTTCCTAACTATAAGCTCATAACTCCAGCTGTTGTCTCTGAGAGACTGAAGATTCGC
GGCTCGCTGGCCAGAGCTGCCCTTCAGGAGCTCCTCAGTAAAGGGCTTATTAAACTGGTATCAAAACACAGAGCTCAAGT
AATCTACACCAGAAACACCAAGGGTGGAGATGCCCCAGCTGCTGGTGAAGATGCATGA
ATGCCACCCAAGGACGACAAGAAGAAAAAAGATGCCGGAAAATCGGCCAAGAAAGACAAAGATCCGGTGAACAAGTCTGG
GGGAAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGCTTAATAACCTCGTCTTGTTTGACAAAGCCA
CGTATGACAAGCTTTGTAAAGAAGTTCCTAACTATAAGCTCATAACTCCAGCTGTTGTCTCTGAGAGACTGAAGATTCGC
GGCTCGCTGGCCAGAGCTGCCCTTCAGGAGCTCCTCAGTAAAGGGCTTATTAAACTGGTATCAAAACACAGAGCTCAAGT
AATCTACACCAGAAACACCAAGGGTGGAGATGCCCCAGCTGCTGGTGAAGATGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 165 .28 RPM |
| SRP017611_kidney | 231 .61 RPM |
| SRP017611_brain | 92 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000027772 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013691 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007880 | ortholog_one2one | 7 retrogenes | |
| Equus caballus | ENSECAG00000020978 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000009927 | possible_ortholog | 15 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007265 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_250 | 67.19 | 99.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_281 | 92.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_353 | 88.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_424 | 71.20 | 99.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_eeur_519 | 78.81 | 92.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_eeur_675 | 72.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000014630 retrocopies