Parental gene:

Rps25, ENSMUSG00000009927

Aliases:Rps25, 2810009D21Rik
Description:ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1922867]
Organism:Mouse (Mus musculus)
Coordinates:9:44407713..44410405(+)


>ENSMUSG00000009927
ATGCCTCCCAAAGACGACAAGAAGAAGAAAGATGCCGGAAAGTCGGCCAAAAAGGATAAAGACCCAGTAAATAAATCTGG
TGGCAAGGCCAAGAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGTTGAACAATCTTGTCCTGTTCGACAAAGCGA
CATACGACAAGCTCTGTAAGGAGGTTCCGAACTATAAGCTTATTACTCCAGCCGTGGTCTCTGAGAGACTGAAGATTCGC
GGTTCCTTGGCCAGGGCAGCCCTTCAGGAGCTCCTTAGTAAAGGACTTATCAAGCTGGTTTCAAAGCACAGAGCCCAAGT
AATTTACACCAGAAACACAAAGGGTGGGGACGCTCCAGCTGCTGGCGAAGATGCATGA

Library Parental gene expression (RPM)
SRP007412_brain 51 .91 RPM
SRP007412_cerebellum 34 .65 RPM
SRP007412_heart 53 .73 RPM
SRP007412_kidney 63 .54 RPM
SRP007412_liver 64 .01 RPM
SRP007412_testis 52 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027772 possible_ortholog 2 retrogenes
retro_btau_203, retro_btau_9,
Callithrix jacchus ENSCJAG00000013691 possible_ortholog 1 retrogene
retro_cjac_208,
Dasypus novemcinctus ENSDNOG00000007880 ortholog_one2many 7 retrogenes
retro_dnov_1092, retro_dnov_1566, retro_dnov_2219, retro_dnov_2593, retro_dnov_346, retro_dnov_877, retro_dnov_973,
Equus caballus ENSECAG00000020978 possible_ortholog 2 retrogenes
retro_ecab_89, retro_ecab_976,
Erinaceus europaeus ENSEEUG00000014630 possible_ortholog 6 retrogenes
retro_eeur_250, retro_eeur_281, retro_eeur_353, retro_eeur_424, retro_eeur_519, retro_eeur_675,
Homo sapiens ENSG00000118181 possible_ortholog 3 retrogenes
retro_hsap_3371, retro_hsap_3547, retro_hsap_4310,
Gorilla gorilla ENSGGOG00000025540 possible_ortholog 7 retrogenes
retro_ggor_1601, retro_ggor_1666, retro_ggor_1979, retro_ggor_2395, retro_ggor_2880, retro_ggor_337, retro_ggor_634,
Latimeria chalumnae ENSLACG00000017531 possible_ortholog 4 retrogenes
retro_lcha_101, retro_lcha_118, retro_lcha_50, retro_lcha_72,
Macropus eugenii ENSMEUG00000014185 possible_ortholog 3 retrogenes
retro_meug_1181, retro_meug_1562, retro_meug_174,
Oryctolagus cuniculus ENSOCUG00000017256 possible_ortholog 11 retrogenes
retro_ocun_1166, retro_ocun_1231, retro_ocun_1319, retro_ocun_1553, retro_ocun_1761, retro_ocun_291, retro_ocun_298, retro_ocun_548, retro_ocun_623, retro_ocun_856, retro_ocun_978,
Otolemur garnettii ENSOGAG00000007265 possible_ortholog 3 retrogenes
retro_ogar_220, retro_ogar_257, retro_ogar_32,
Ochotona princeps ENSOPRG00000016194 possible_ortholog 9 retrogenes
retro_opri_1099, retro_opri_1204, retro_opri_256, retro_opri_320, retro_opri_393, retro_opri_493, retro_opri_64, retro_opri_854, retro_opri_873,
Pongo abelii ENSPPYG00000025915 possible_ortholog 6 retrogenes
retro_pabe_1889, retro_pabe_1971, retro_pabe_2930, retro_pabe_3507, retro_pabe_71, retro_pabe_94,
Pan troglodytes ENSPTRG00000004361 possible_ortholog 10 retrogenes
retro_ptro_1368, retro_ptro_1494, retro_ptro_1579, retro_ptro_1722, retro_ptro_1935, retro_ptro_2291, retro_ptro_2411, retro_ptro_245, retro_ptro_2918, retro_ptro_536,
Pteropus vampyrus ENSPVAG00000012492 possible_ortholog 12 retrogenes
retro_pvam_1066, retro_pvam_1176, retro_pvam_1202, retro_pvam_1287, retro_pvam_130, retro_pvam_1418, retro_pvam_1448, retro_pvam_247, retro_pvam_277, retro_pvam_426, retro_pvam_653, retro_pvam_668,
Rattus norvegicus ENSRNOG00000027503 ortholog_one2one 5 retrogenes
retro_rnor_1430, retro_rnor_157, retro_rnor_893, retro_rnor_90, retro_rnor_992,
Sorex araneus ENSSARG00000002284 possible_ortholog 4 retrogenes
retro_sara_21, retro_sara_212, retro_sara_43, retro_sara_542,
Tupaia belangeri ENSTBEG00000010244 possible_ortholog 16 retrogenes
retro_tbel_1592, retro_tbel_1823, retro_tbel_1849, retro_tbel_22, retro_tbel_2651, retro_tbel_2744, retro_tbel_3106, retro_tbel_3107, retro_tbel_3499, retro_tbel_374, retro_tbel_3871, retro_tbel_3877, retro_tbel_4239, retro_tbel_4434, retro_tbel_444, retro_tbel_4464,
Tarsius syrichta ENSTSYG00000005422 possible_ortholog 15 retrogenes
retro_tsyr_1050, retro_tsyr_1098, retro_tsyr_1125, retro_tsyr_1230, retro_tsyr_1252, retro_tsyr_1454, retro_tsyr_154, retro_tsyr_1558, retro_tsyr_2081, retro_tsyr_358, retro_tsyr_414, retro_tsyr_428, retro_tsyr_570, retro_tsyr_859, retro_tsyr_873,
Vicugna pacos ENSVPAG00000000266 possible_ortholog 4 retrogenes
retro_vpac_106, retro_vpac_118, retro_vpac_337, retro_vpac_546,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_128 64.86 85.60
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_336 55.28 98.40
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmus_880 94.69 89.60
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmus_1368 83.46 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmus_1455 93.65 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmus_1760 99.20 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmus_1769 53.17 97.60
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmus_1788 88.10 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmus_2375 90.48 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmus_2393 75.83 94.40
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_mmus_2641 91.34 100.00
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_mmus_2700 95.20 100.00
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_mmus_2797 98.40 100.00
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_mmus_3218 98.40 100.00
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_mmus_3523 69.29 98.40
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000009927 retrocopies