Parental gene:

UBE2D4, ENSG00000078967

Aliases:UBE2D4, HBUCE1
Description:ubiquitin-conjugating enzyme E2D 4 (putative) [Source:HGNC Symbol;Acc:21647]
Organism:Human (Homo sapiens)
Coordinates:7:43966036..43993166(+)


>ENSG00000078967
ATGGCGCTAAAGCGGATCCAGAAGGAATTAACCGACTTGCAGAGGGATCCTCCTGCCCAGTGTTCTGCAGGACCTGTCGG
TGATGACTTGTTCCACTGGCAGGCCACCATCATGGGCCCGAATGACAGTCCTTACCAAGGAGGTGTTTTCTTCCTGACCA
TCCACTTTCCTACAGATTACCCGTTCAAGCCCCCAAAGGTTGCTTTCACAACCAAAATTTATCACCCTAATATCAACAGC
AATGGCAGCATCTGCCTTGATATCCTGCGGTCTCAGTGGTCTCCAGCGTTGACTGTGTCAAAAGTTCTCTTGTCCATCTG
CTCGCTGCTCTGCGACCCCAACCCCGATGACCCCCTGGTGCCAGAGATAGCACACACCTACAAGGCCGACAGAGAGAAGT
ACAACAGACTAGCAAGAGAGTGGACACAAAAATATGCTATGTAA

Library Parental gene expression (RPM)
bodymap2_liver 6 .38 RPM
bodymap2_lung 3 .96 RPM
bodymap2_breast 12 .55 RPM
bodymap2_adipose 4 .55 RPM
bodymap2_adrenal 6 .65 RPM
bodymap2_skeletal_muscle 24 .68 RPM
bodymap2_thyroid 7 .85 RPM
bodymap2_prostate 11 .79 RPM
bodymap2_colon 7 .91 RPM
bodymap2_testis 6 .07 RPM
bodymap2_brain 7 .74 RPM
bodymap2_heart 12 .94 RPM
bodymap2_white_blood_cells 4 .69 RPM
bodymap2_lymph_node 9 .81 RPM
bodymap2_ovary 8 .94 RPM
bodymap2_kidney 7 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003997 ortholog_one2one 1 retrogene
retro_btau_1261,
Callithrix jacchus ENSCJAG00000007875 ortholog_one2one 4 retrogenes
retro_cjac_1660, retro_cjac_3666, retro_cjac_3882, retro_cjac_925,
Dipodomys ordii ENSDORG00000006888 ortholog_one2one 5 retrogenes
retro_dord_104, retro_dord_345, retro_dord_408, retro_dord_743, retro_dord_760,
Homo sapiens ENSG00000072401 within_species_paralog 2 retrogenes
retro_hsap_4723, retro_hsap_4725,
Homo sapiens ENSG00000170035 other_paralog 1 retrogene
retro_hsap_4653,
Homo sapiens ENSG00000185651 within_species_paralog 4 retrogenes
retro_hsap_1094, retro_hsap_1185, retro_hsap_1338, retro_hsap_1960,
Gorilla gorilla ENSGGOG00000003378 ortholog_one2one 3 retrogenes
retro_ggor_1843, retro_ggor_2936, retro_ggor_436,
Myotis lucifugus ENSMLUG00000011919 ortholog_one2one 3 retrogenes
retro_mluc_1826, retro_mluc_1827, retro_mluc_594,
Macaca mulatta ENSMMUG00000002410 ortholog_one2one 5 retrogenes
retro_mmul_1067, retro_mmul_1937, retro_mmul_2514, retro_mmul_2515, retro_mmul_531,
Nomascus leucogenys ENSNLEG00000003364 ortholog_one2one 3 retrogenes
retro_nleu_54, retro_nleu_876, retro_nleu_90,
Oryctolagus cuniculus ENSOCUG00000008900 ortholog_one2one 1 retrogene
retro_ocun_1058,
Pongo abelii ENSPPYG00000029727 ortholog_one2one 1 retrogene
retro_pabe_3573,
Sus scrofa ENSSSCG00000016722 ortholog_one2one 2 retrogenes
retro_sscr_671, retro_sscr_79,
Tupaia belangeri ENSTBEG00000003691 ortholog_one2one 9 retrogenes
retro_tbel_1273, retro_tbel_2535, retro_tbel_2782, retro_tbel_307, retro_tbel_367, retro_tbel_37, retro_tbel_4118, retro_tbel_4163, retro_tbel_4312,
Tarsius syrichta ENSTSYG00000000595 ortholog_one2one 14 retrogenes
retro_tsyr_1007, retro_tsyr_1145, retro_tsyr_1162, retro_tsyr_1314, retro_tsyr_1392, retro_tsyr_1415, retro_tsyr_1677, retro_tsyr_1694, retro_tsyr_1859, retro_tsyr_683, retro_tsyr_789, retro_tsyr_836, retro_tsyr_838, retro_tsyr_919,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_452 75.23 98.17
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2. retro_hsap_453 75.93 98.17
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Download FASTA sequences of all ENSG00000078967 retrocopies